[←][→] ath   AT4G15180 Gene
functional annotation
Function   SET domain protein 2  
GO BP
GO:0048440 [list] [network] carpel development  (79 genes)  IMP  
GO:0048443 [list] [network] stamen development  (101 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0009791 [list] [network] post-embryonic development  (1519 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0042800 [list] [network] histone methyltransferase activity (H3-K4 specific)  (5 genes)  IDA  
KEGG ath00310 [list] [network] Lysine degradation (38 genes)
Protein NP_193253.4 
BLAST NP_193253.4 
Orthologous [Ortholog page] LOC4344819 (osa)  LOC11418042 (mtr)  LOC25492033 (mtr)  LOC100194363 (zma)  LOC100263702 (vvi)  LOC100776205 (gma)  LOC100781921 (gma)  LOC100804519 (gma)  LOC100815409 (gma)  LOC101244888 (sly)  LOC103653034 (zma)  LOC103868359 (bra)  LOC103871033 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_193253.4)
Subcellular
localization
TargetP
other 7  (predict for NP_193253.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SDG2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.7 AT4G31570 nucleoporin [detail] 829284
15.1 SYD P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817375
14.8 UPL2 ubiquitin-protein ligase 2 [detail] 843368
14.1 AT5G24350 neuroblastoma-amplified sequence protein [detail] 832505
14.0 AT3G15120 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820743
13.8 HAC1 histone acetyltransferase of the CBP family 1 [detail] 844241
13.7 HAC12 histone acetyltransferase of the CBP family 12 [detail] 838242
13.0 CHR5 chromatin remodeling 5 [detail] 815823
12.7 AT3G52250 Duplicated homeodomain-like superfamily protein [detail] 824390
12.7 HAF01 HAC13 protein (HAC13) [detail] 840169
12.4 CHR4 chromatin remodeling 4 [detail] 834510
12.2 GTB1 global transcription factor group B1 [detail] 842855
12.0 MOM ATP-dependent helicase family protein [detail] 837322
11.8 NERD GW repeat- and PHD finger-containing protein NERD [detail] 816147
11.7 BRM transcription regulatory protein SNF2 [detail] 819210
11.6 EFS histone-lysine N-methyltransferase [detail] 844066
11.3 SAB HYPERSENSITIVE TO PI STARVATION 4 [detail] 842193
11.2 EMB2773 PHD finger family protein [detail] 831407
11.2 MBD9 methyl-CPG-binding domain 9 [detail] 821132
11.0 HB-1 homeobox-1 [detail] 839740
10.8 AT3G63070 Tudor/PWWP/MBT domain-containing protein [detail] 825482
10.1 AT1G77800 PHD finger family protein [detail] 844117
10.1 ABCD1 peroxisomal ABC transporter 1 [detail] 830144
10.1 SNL3 SIN3-like 3 [detail] 839032
10.0 SNL1 SIN3-like 1 [detail] 821265
9.8 TNO1 TGN-related, localized SYP41 interacting protein [detail] 839062
9.7 AT5G12400 PHD-finger and DNA binding domain-containing protein [detail] 831115
9.5 SNL2 SIN3-like 2 [detail] 831354
9.3 AT3G21290 dentin sialophosphoprotein-like protein [detail] 821683
9.0 AT2G19390 serine/arginine repetitive matrix protein [detail] 816458
8.9 AT2G40770 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein [detail] 818674
8.9 FAB1A 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A [detail] 829460
8.7 AT4G39420 spatacsin carboxy-terminus protein [detail] 830097
8.7 AT4G32620 Enhancer of polycomb-like transcription factor protein [detail] 829397
8.5 RLT2 Homeodomain-like transcriptional regulator [detail] 834441
8.3 AT5G49430 WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein [detail] 835003
8.1 HAC5 histone acetyltransferase of the CBP family 5 [detail] 820484
7.9 AT1G63490 transcription factor jumonji (jmjC) domain-containing protein [detail] 842655
7.8 AT1G16800 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 838251
7.7 SDG25 SET domain protein 25 [detail] 834246
7.5 ATG2 autophagy 2 [detail] 821453
7.4 AT2G42270 U5 small nuclear ribonucleoprotein helicase [detail] 818828
7.4 SPA2 SPA1-related 2 [detail] 826712
7.0 FAB1C FORMS APLOID AND BINUCLEATE CELLS 1C [detail] 843440
6.4 AT4G32700 MUS308 and mammalian DNA polymerase-like protein [detail] 829406
5.5 SDG29 SET domain group 29 [detail] 835424
Coexpressed
gene list		 [Coexpressed gene list for SDG2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245536_at
245536_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245536_at
245536_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245536_at
245536_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827183      
Refseq ID (protein) NP_193253.4 


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