[←][→] ath   AT4G15415 Gene
functional annotation
Function   Protein phosphatase 2A regulatory B subunit family protein  
GO BP
GO:0033353 [list] [network] S-adenosylmethionine cycle  (2 genes)  IMP  
GO:0090342 [list] [network] regulation of cell aging  (4 genes)  IMP  
GO:0009759 [list] [network] indole glucosinolate biosynthetic process  (6 genes)  IMP  
GO:0031952 [list] [network] regulation of protein autophosphorylation  (8 genes)  IBA  
GO:0006555 [list] [network] methionine metabolic process  (29 genes)  IMP  
GO:2000377 [list] [network] regulation of reactive oxygen species metabolic process  (54 genes)  IMP  
GO:0010090 [list] [network] trichome morphogenesis  (62 genes)  IGI  
GO:0031348 [list] [network] negative regulation of defense response  (63 genes)  IMP  
GO:0009742 [list] [network] brassinosteroid mediated signaling pathway  (82 genes)  IEA  
GO:0006470 [list] [network] protein dephosphorylation  (133 genes)  IBA  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO:0006952 [list] [network] defense response  (1420 genes)  IEA  
GO CC
GO:0000159 [list] [network] protein phosphatase type 2A complex  (20 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0072542 [list] [network] protein phosphatase activator activity  (9 genes)  IBA  
GO:0008266 [list] [network] poly(U) RNA binding  (28 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001319948.1  NP_001319949.1  NP_001328412.1  NP_567464.1  NP_849390.1 
BLAST NP_001319948.1  NP_001319949.1  NP_001328412.1  NP_567464.1  NP_849390.1 
Orthologous [Ortholog page] LOC732821 (zma)  AT3G21650 (ath)  AT1G13460 (ath)  LOC4334757 (osa)  LOC4336207 (osa)  LOC4342912 (osa)  LOC4344549 (osa)  LOC7477048 (ppo)  LOC7496643 (ppo)  LOC11432697 (mtr)  LOC11446412 (mtr)  LOC25495704 (mtr)  LOC100245943 (vvi)  LOC100250839 (vvi)  LOC100258598 (vvi)  LOC100279734 (zma)  LOC100501635 (zma)  LOC100775767 (gma)  LOC100785874 (gma)  LOC100795156 (gma)  LOC100797758 (gma)  LOC100807697 (gma)  LOC100811438 (gma)  LOC100814863 (gma)  LOC101246839 (sly)  LOC101250942 (sly)  LOC101251646 (sly)  LOC101257170 (sly)  LOC103628994 (zma)  LOC103646298 (zma)  LOC103647325 (zma)  LOC103854390 (bra)  LOC103869158 (bra)  LOC103870944 (bra)  LOC103872058 (bra)  LOC103875329 (bra) 
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 3,  nucl 2  (predict for NP_001319948.1)
mito 4,  chlo_mito 4,  chlo 3,  nucl 2  (predict for NP_001319949.1)
chlo 4,  chlo_mito 3,  nucl 3,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for NP_001328412.1)
mito 4,  chlo_mito 4,  chlo 3,  nucl 2  (predict for NP_567464.1)
mito 4,  chlo_mito 4,  chlo 3,  nucl 2  (predict for NP_849390.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001319948.1)
chlo 6  (predict for NP_001319949.1)
chlo 6  (predict for NP_001328412.1)
chlo 6  (predict for NP_567464.1)
chlo 6  (predict for NP_849390.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 5
Genes directly connected with ATB' GAMMA on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 ATB' DELTA serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta [detail] 822200
6.3 AT5G25510 Protein phosphatase 2A regulatory B subunit family protein [detail] 832626
6.2 AT3G54190 Transducin/WD40 repeat-like superfamily protein [detail] 824586
5.9 AT2G23520 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [detail] 816884
5.6 TOPP5 type one serine/threonine protein phosphatase 5 [detail] 823835
5.3 BPM5 BTB-POZ and MATH domain 5 [detail] 832225
Coexpressed
gene list		 [Coexpressed gene list for ATB' GAMMA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245248_at
245248_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245248_at
245248_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245248_at
245248_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827211      
Refseq ID (protein) NP_001319948.1 
NP_001319949.1 
NP_001328412.1 
NP_567464.1 
NP_849390.1 


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