[←][→] ath   At4g15520 Gene
functional annotation
Function   tRNA/rRNA methyltransferase (SpoU) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0001510 [list] [network] RNA methylation  (28 genes)  ISS  
GO:0006396 [list] [network] RNA processing  (567 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (23 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IEA  
KEGG
Protein NP_193287.1 
BLAST NP_193287.1 
Orthologous [Ortholog page] LOC4337763 (osa)  LOC7469097 (ppo)  LOC11408462 (mtr)  LOC100305780 (gma)  LOC101267645 (sly)  LOC103860786 (bra)  LOC103870822 (bra)  LOC123111037 (tae)  LOC123180375 (tae)  LOC123190742 (tae)  LOC123424361 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  mito 1  (predict for NP_193287.1)
Subcellular
localization
TargetP
other 3  (predict for NP_193287.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G15520 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 QQT1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 832298
6.8 emb2735 embryo defective 2735 [detail] 830511
6.6 AT3G04600 Nucleotidylyl transferase superfamily protein [detail] 819617
6.0 AT4G17010 transcription factor IIIB [detail] 827409
5.4 SEN2 splicing endonuclease 2 [detail] 836145
5.4 AT5G35400 Pseudouridine synthase family protein [detail] 833501
Coexpressed
gene list		 [Coexpressed gene list for AT4G15520]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245562_at
245562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245562_at
245562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245562_at
245562_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827225      
Refseq ID (protein) NP_193287.1 


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