[←][→] ath   AT4G16144 Gene
functional annotation
Function   associated molecule with the SH3 domain of STAM 3  
GO BP
GO:0044090 [list] [network] positive regulation of vacuole organization  (3 genes)  IMP  
GO:0070536 [list] [network] protein K63-linked deubiquitination  (4 genes)  IBA IDA  
GO:0071108 [list] [network] protein K48-linked deubiquitination  (4 genes)  IBA IDA  
GO:0016926 [list] [network] protein desumoylation  (8 genes)  IDA  
GO:0090316 [list] [network] positive regulation of intracellular protein transport  (10 genes)  IMP  
GO:0000338 [list] [network] protein deneddylation  (11 genes)  IDA  
GO:0016579 [list] [network] protein deubiquitination  (48 genes)  IBA  
GO:0007033 [list] [network] vacuole organization  (54 genes)  IMP  
GO:0006897 [list] [network] endocytosis  (60 genes)  IMP  
GO:0019941 [list] [network] modification-dependent protein catabolic process  (445 genes)  IDA  
GO:0046907 [list] [network] intracellular transport  (626 genes)  IMP  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005770 [list] [network] late endosome  (91 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IBA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IEA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IDA  
GO:0016020 [list] [network] membrane  (7839 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IBA  
GO:0008237 [list] [network] metallopeptidase activity  (69 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_680708.7 
BLAST NP_680708.7 
Orthologous [Ortholog page] AMSH1 (ath)  LOC4324542 (osa)  LOC4326798 (osa)  LOC7453881 (ppo)  LOC11414692 (mtr)  LOC11417013 (mtr)  LOC11423551 (mtr)  LOC100243131 (vvi)  LOC100264578 (vvi)  LOC100283490 (zma)  LOC100284313 (zma)  LOC100777366 (gma)  LOC100800636 (gma)  LOC100804754 (gma)  LOC100806201 (gma)  LOC100806590 (gma)  LOC100812784 (gma)  LOC101258096 (sly)  LOC101266109 (sly)  LOC103650155 (zma)  LOC103832981 (bra)  LOC103860829 (bra)  LOC103871444 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  nucl_plas 3,  extr 1,  cysk 1  (predict for NP_680708.7)
Subcellular
localization
TargetP
other 9  (predict for NP_680708.7)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath03040 Spliceosome 2
Genes directly connected with AMSH3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein [detail] 840321
7.3 DCP1 decapping 1 [detail] 837357
7.3 EER4 Transcription initiation factor TFIID subunit A [detail] 838316
6.2 AT2G28390 SAND family protein [detail] 817387
6.0 AT2G10950 BSD domain-containing protein [detail] 815559
5.6 AT2G33490 hydroxyproline-rich glycoprotein family protein [detail] 817914
5.6 RGLG2 RING domain ligase2 [detail] 831293
5.2 AT3G32940 RNA-binding KH domain-containing protein [detail] 823058
Coexpressed
gene list		 [Coexpressed gene list for AMSH3]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 827303      
Refseq ID (protein) NP_680708.7 


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