[←][→] ath   AT4G16280 Gene
functional annotation
Function   flowering time control protein FCA  
GO BP
GO:0031048 [list] [network] chromatin silencing by small RNA  (13 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (146 genes)  IGI  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IGI  
GO:0030154 [list] [network] cell differentiation  (695 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (160 genes)  TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0010427 [list] [network] abscisic acid binding  (19 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319956.1  NP_193363.4  NP_680713.2  NP_849542.2 
BLAST NP_001319956.1  NP_193363.4  NP_680713.2  NP_849542.2 
Orthologous [Ortholog page] LOC4346429 (osa)  LOC11418334 (mtr)  FCA (vvi)  LOC100383162 (zma)  LOC100786792 (gma)  LOC100798390 (gma)  LOC101267262 (sly)  FCA (bra) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001319956.1)
nucl 9,  cyto_nucl 5  (predict for NP_193363.4)
nucl 10  (predict for NP_680713.2)
nucl 9  (predict for NP_849542.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001319956.1)
other 9  (predict for NP_193363.4)
other 7  (predict for NP_680713.2)
other 6,  mito 3  (predict for NP_849542.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with FCA on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 SUA suppressor of abi3-5 [detail] 824590
7.3 SUF4 zinc finger (C2H2 type) family protein [detail] 839984
7.1 HUA2 Tudor/PWWP/MBT domain-containing protein [detail] 832379
Coexpressed
gene list		 [Coexpressed gene list for FCA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245489_at
245489_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245489_at
245489_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245489_at
245489_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827323      
Refseq ID (protein) NP_001319956.1 
NP_193363.4 
NP_680713.2 
NP_849542.2 


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