[←][→] ath   AT4G17610 Gene
functional annotation
Function   tRNA/rRNA methyltransferase (SpoU) family protein  
GO BP
GO:0030488 [list] [network] tRNA methylation  (26 genes)  IBA  
GO:0001510 [list] [network] RNA methylation  (59 genes)  ISS  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0016423 [list] [network] tRNA (guanine) methyltransferase activity  (12 genes)  IBA  
KEGG
Protein NP_001319976.1  NP_001329531.1  NP_001329532.1 
BLAST NP_001319976.1  NP_001329531.1  NP_001329532.1 
Orthologous [Ortholog page] LOC4331280 (osa)  LOC25493589 (mtr)  LOC100278565 (zma)  LOC100809637 (gma)  LOC100855390 (vvi)  LOC101255721 (sly)  LOC103855553 (bra) 
Subcellular
localization
wolf
vacu 3,  nucl 2,  plas 1,  golg 1,  golg_plas 1  (predict for NP_001319976.1)
vacu 3,  nucl 2,  plas 1,  golg 1,  golg_plas 1  (predict for NP_001329531.1)
vacu 3,  nucl 2,  plas 1,  golg 1,  golg_plas 1  (predict for NP_001329532.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_001319976.1)
scret 6  (predict for NP_001329531.1)
scret 6  (predict for NP_001329532.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 4
ath03008 Ribosome biogenesis in eukaryotes 2
ath03018 RNA degradation 2
ath03015 mRNA surveillance pathway 2
ath00230 Purine metabolism 2
Genes directly connected with AT4G17610 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 EMB2788 ribosome 60S biogenesis amino-terminal protein [detail] 828809
7.1 AT2G37690 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase [detail] 818346
7.1 AT3G14120 nuclear pore complex protein [detail] 820629
Coexpressed
gene list		 [Coexpressed gene list for AT4G17610]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245404_at
245404_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245404_at
245404_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245404_at
245404_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827480      
Refseq ID (protein) NP_001319976.1 
NP_001329531.1 
NP_001329532.1 


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