[←][→] ath   AT4G17620 Gene
functional annotation
Function   glycine-rich protein  
GO BP
GO:0000956 [list] [network] nuclear-transcribed mRNA catabolic process  (71 genes)  IDA  
GO:0090305 [list] [network] nucleic acid phosphodiester bond hydrolysis  (71 genes)  IDA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA ISM  
GO MF
GO:0004534 [list] [network] 5'-3' exoribonuclease activity  (5 genes)  IDA  
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (32 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IDA  
KEGG
Protein NP_001031654.1  NP_001190756.1  NP_193498.2 
BLAST NP_001031654.1  NP_001190756.1  NP_193498.2 
Orthologous [Ortholog page] LOC9268788 (osa)  LOC11426961 (mtr)  LOC100248998 (vvi)  LOC100778656 (gma)  LOC100798780 (gma)  LOC100855043 (vvi)  LOC101250912 (sly)  LOC103630321 (zma)  LOC103855575 (bra)  LOC103860925 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001031654.1)
nucl 6,  pero 1,  cyto 1,  mito 1,  vacu 1  (predict for NP_001190756.1)
nucl 6,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_193498.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001031654.1)
chlo 9  (predict for NP_001190756.1)
chlo 9  (predict for NP_193498.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT4G17620 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 AT5G09390 CD2-binding protein-like protein [detail] 830798
6.4 AT3G52660 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 824432
6.3 TFL2 like heterochromatin protein (LHP1) [detail] 831635
Coexpressed
gene list		 [Coexpressed gene list for AT4G17620]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245374_at
245374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245374_at
245374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245374_at
245374_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827482      
Refseq ID (protein) NP_001031654.1 
NP_001190756.1 
NP_193498.2 


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