[←][→] ath   AT4G20820 Gene
functional annotation
Function   FAD-binding Berberine family protein  
GO BP
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0071949 [list] [network] FAD binding  (68 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IEA  
KEGG
Protein NP_193814.1 
BLAST NP_193814.1 
Orthologous [Ortholog page] LOC732592 (gma)  LOC732593 (gma)  MEE23 (ath)  AT4G20860 (ath)  AT5G44360 (ath)  AT5G44380 (ath)  AT5G44390 (ath)  AT5G44400 (ath)  AT5G44410 (ath)  AT5G44440 (ath)  AT1G30700 (ath)  AT1G30760 (ath)  LOC4341253 (osa)  LOC4341257 (osa)  LOC4341258 (osa)  LOC4341259 (osa)  LOC4341261 (osa)  LOC7457662 (ppo)  LOC7471681 (ppo)  LOC7480403 (ppo)  LOC7480408 (ppo)  LOC7480409 (ppo)  LOC7480410 (ppo)  LOC7485160 (ppo)  LOC7485161 (ppo)  LOC7489112 (ppo)  LOC7489114 (ppo)  LOC7489116 (ppo)  LOC7489117 (ppo)  LOC11406991 (mtr)  LOC11415235 (mtr)  LOC11415951 (mtr)  LOC11416804 (mtr)  LOC11422032 (mtr)  LOC11422989 (mtr)  LOC25486316 (mtr)  LOC25486318 (mtr)  LOC25486319 (mtr)  LOC25493334 (mtr)  LOC25493352 (mtr)  LOC25493353 (mtr)  LOC25493354 (mtr)  LOC25493355 (mtr)  LOC25493356 (mtr)  LOC25493357 (mtr)  LOC25493365 (mtr)  LOC25493366 (mtr)  LOC100242277 (vvi)  LOC100243731 (vvi)  LOC100245584 (vvi)  LOC100247412 (vvi)  LOC100248870 (vvi)  LOC100250740 (vvi)  LOC100252519 (vvi)  LOC100253961 (vvi)  LOC100255905 (vvi)  LOC100266314 (vvi)  LOC100267923 (vvi)  LOC100276794 (zma)  LOC100282250 (zma)  LOC100775353 (gma)  LOC100777594 (gma)  LOC100778568 (gma)  LOC100779395 (gma)  LOC100780114 (gma)  LOC100780461 (gma)  LOC100781004 (gma)  LOC100782093 (gma)  LOC100782292 (gma)  LOC100782631 (gma)  LOC100786800 (gma)  LOC100794074 (gma)  LOC100796276 (gma)  LOC100799990 (gma)  LOC100800519 (gma)  LOC100801058 (gma)  LOC100802131 (gma)  LOC100803041 (gma)  LOC100810481 (gma)  LOC100811019 (gma)  LOC100811558 (gma)  LOC100812087 (gma)  LOC100813706 (gma)  LOC101249413 (sly)  LOC101249763 (sly)  LOC101254601 (sly)  LOC101254908 (sly)  LOC101254965 (sly)  LOC101255262 (sly)  LOC101255854 (sly)  LOC101256448 (sly)  LOC101263376 (sly)  LOC101263972 (sly)  LOC101264289 (sly)  LOC101265606 (sly)  LOC102662170 (gma)  LOC103629835 (zma)  LOC103629842 (zma)  LOC103638604 (zma)  LOC103827902 (bra)  LOC103827906 (bra)  LOC103828799 (bra)  LOC103839175 (bra)  LOC103839178 (bra)  LOC103839179 (bra)  LOC103839182 (bra)  LOC103839322 (bra)  LOC103840305 (bra)  LOC103840313 (bra)  LOC103841228 (bra)  LOC103858400 (bra)  LOC103858430 (bra)  LOC103858724 (bra)  LOC103867418 (bra)  LOC104645788 (sly)  LOC104646055 (sly)  LOC107275394 (osa) 
Subcellular
localization
wolf
chlo 7,  vacu 2  (predict for NP_193814.1)
Subcellular
localization
TargetP
chlo 5,  scret 3  (predict for NP_193814.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 4
ath00270 Cysteine and methionine metabolism 2
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
ath00260 Glycine, serine and threonine metabolism 2
Genes directly connected with AT4G20820 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.9 SHM7 serine hydroxymethyltransferase 7 [detail] 840543
8.7 MSRB5 methionine sulfoxide reductase B5 [detail] 825820
8.0 ATSDI1 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834943
4.9 AT4G20840 FAD-binding Berberine family protein [detail] 827832
Coexpressed
gene list		 [Coexpressed gene list for AT4G20820]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254430_at
254430_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254430_at
254430_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254430_at
254430_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827830      
Refseq ID (protein) NP_193814.1 


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