[←][→] ath   AT4G00460 Gene
functional annotation
Function   RHO guanyl-nucleotide exchange factor 3  
GO BP
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005089 [list] [network] Rho guanyl-nucleotide exchange factor activity  (16 genes)  IEA ISS  
KEGG
Protein NP_001118903.1  NP_001328183.1  NP_001328184.1  NP_191956.2 
BLAST NP_001118903.1  NP_001328183.1  NP_001328184.1  NP_191956.2 
Orthologous [Ortholog page] ROPGEF4 (ath)  ROPGEF2 (ath)  LOC4336643 (osa)  LOC4343233 (osa)  LOC4349314 (osa)  LOC7496968 (ppo)  LOC11436941 (mtr)  LOC25500877 (mtr)  LOC100191669 (zma)  LOC100246463 (vvi)  LOC100382507 (zma)  LOC100785956 (gma)  LOC100789051 (gma)  LOC100806086 (gma)  LOC100811579 (gma)  LOC101255922 (sly)  LOC103633172 (zma)  LOC103836917 (bra)  LOC103858869 (bra)  LOC103866931 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001118903.1)
nucl 5,  cyto 3,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001328183.1)
chlo 7,  extr 2  (predict for NP_001328184.1)
nucl 4,  cyto_nucl 4,  cyto 2,  chlo 1,  extr 1,  pero 1,  chlo_mito 1  (predict for NP_191956.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001118903.1)
other 8  (predict for NP_001328183.1)
other 3  (predict for NP_001328184.1)
other 8  (predict for NP_191956.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
Genes directly connected with ROPGEF3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.5 IRE AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [detail] 836352
4.4 SDH1-2 succinate dehydrogenase 1-2 [detail] 816359
4.4 GXM2 glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [detail] 826590
4.1 AT1G65180 Cysteine/Histidine-rich C1 domain family protein [detail] 842825
Coexpressed
gene list		 [Coexpressed gene list for ROPGEF3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255757_at
255757_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255757_at
255757_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255757_at
255757_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827967      
Refseq ID (protein) NP_001118903.1 
NP_001328183.1 
NP_001328184.1 
NP_191956.2 


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