[←][→] ath   AT4G00830 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:1905933 [list] [network] regulation of cell fate determination  (1 genes)  IMP  
GO:1902464 [list] [network] regulation of histone H3-K27 trimethylation  (3 genes)  IMP  
GO:0010439 [list] [network] regulation of glucosinolate biosynthetic process  (12 genes)  IMP  
GO:0045824 [list] [network] negative regulation of innate immune response  (22 genes)  IMP  
GO:0071395 [list] [network] cellular response to jasmonic acid stimulus  (75 genes)  IDA  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (322 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO:0009617 [list] [network] response to bacterium  (479 genes)  IEP  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IDA  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IMP  
GO:0010468 [list] [network] regulation of gene expression  (2484 genes)  IMP  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0003682 [list] [network] chromatin binding  (126 genes)  IDA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001031566.1  NP_001190647.2  NP_001190648.1  NP_001328329.1  NP_001328330.1  NP_567192.1 
BLAST NP_001031566.1  NP_001190647.2  NP_001190648.1  NP_001328329.1  NP_001328330.1  NP_567192.1 
Orthologous [Ortholog page] LOC4348127 (osa)  LOC4350209 (osa)  LOC7455357 (ppo)  LOC11423198 (mtr)  LOC100191663 (zma)  LOC100241942 (vvi)  LOC100790907 (gma)  LOC100800974 (gma)  LOC101268517 (sly)  LOC103836847 (bra)  LOC103858818 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001031566.1)
nucl 10  (predict for NP_001190647.2)
nucl 9  (predict for NP_001190648.1)
nucl 10  (predict for NP_001328329.1)
nucl 9  (predict for NP_001328330.1)
nucl 9  (predict for NP_567192.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001031566.1)
other 9  (predict for NP_001190647.2)
other 9  (predict for NP_001190648.1)
other 9  (predict for NP_001328329.1)
other 9  (predict for NP_001328330.1)
other 9  (predict for NP_567192.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with LIF2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 CYP59 cyclophilin 59 [detail] 841810
6.9 AT4G21660 proline-rich spliceosome-associated (PSP) family protein [detail] 828253
6.9 emb1220 pre-mRNA processing ribonucleoprotein binding region-containing protein [detail] 842312
Coexpressed
gene list		 [Coexpressed gene list for LIF2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255598_at
255598_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255598_at
255598_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255598_at
255598_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827998      
Refseq ID (protein) NP_001031566.1 
NP_001190647.2 
NP_001190648.1 
NP_001328329.1 
NP_001328330.1 
NP_567192.1 


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