[←][→] ath   AT4G00740 Gene
functional annotation
Function   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein  
GO BP
GO:0052546 [list] [network] cell wall pectin metabolic process  (29 genes)  IMP  
GO:0032259 [list] [network] methylation  (371 genes)  IEA  
GO CC
GO:0000138 [list] [network] Golgi trans cisterna  (85 genes)  HDA  
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IDA  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005768 [list] [network] endosome  (424 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IDA  
GO:0016020 [list] [network] membrane  (7839 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity  (176 genes)  IBA IDA  
KEGG
Protein NP_001328335.1  NP_567184.1 
BLAST NP_001328335.1  NP_567184.1 
Orthologous [Ortholog page] LOC4336707 (osa)  LOC7464892 (ppo)  LOC11426702 (mtr)  LOC25502320 (mtr)  LOC100255820 (vvi)  LOC100778824 (gma)  LOC100782539 (gma)  LOC100788069 (gma)  LOC100812418 (gma)  LOC101258783 (sly)  LOC103646060 (zma)  LOC103836898 (bra)  LOC103858854 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001328335.1)
chlo 4,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_567184.1)
Subcellular
localization
TargetP
mito 8,  other 4  (predict for NP_001328335.1)
mito 8,  other 4  (predict for NP_567184.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
Genes directly connected with QUA3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT2G39750 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 818560
7.7 GAUT9 galacturonosyltransferase 9 [detail] 820474
7.3 AT1G64650 Major facilitator superfamily protein [detail] 842773
6.2 AT1G62330 O-fucosyltransferase family protein [detail] 842531
6.0 AT4G29680 Alkaline-phosphatase-like family protein [detail] 829089
5.5 AT5G04060 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 830285
4.5 AT5G41870 Pectin lyase-like superfamily protein [detail] 834192
Coexpressed
gene list		 [Coexpressed gene list for QUA3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255638_at
255638_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255638_at
255638_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255638_at
255638_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828020      
Refseq ID (protein) NP_001328335.1 
NP_567184.1 


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