[←][→] ath   AT4G03000 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG
Protein NP_001329452.1  NP_001329453.1  NP_001329454.1  NP_001329455.1  NP_192209.2  NP_974504.1 
BLAST NP_001329452.1  NP_001329453.1  NP_001329454.1  NP_001329455.1  NP_192209.2  NP_974504.1 
Orthologous [Ortholog page] LOC4337764 (osa)  LOC7469098 (ppo)  LOC7475938 (ppo)  AT1G03365 (ath)  LOC11427665 (mtr)  LOC11445891 (mtr)  LOC100249384 (vvi)  LOC100775512 (gma)  LOC100777140 (gma)  LOC100785921 (gma)  LOC100793172 (gma)  LOC100818439 (gma)  LOC101262455 (sly)  LOC101262750 (sly)  LOC101263055 (sly)  LOC101267057 (sly)  LOC101268285 (sly)  LOC103633130 (zma)  LOC103647645 (zma)  LOC103836700 (bra)  LOC103844512 (bra) 
Subcellular
localization
wolf
nucl 5,  golg 2,  chlo 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_001329452.1)
nucl 6,  cyto 1,  chlo 1,  mito 1,  golg 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329453.1)
nucl 6,  golg 1,  chlo 1,  plas 1,  vacu 1  (predict for NP_001329454.1)
nucl 6,  cyto 1,  chlo 1,  mito 1,  golg 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329455.1)
nucl 9,  cyto 1,  golg 1  (predict for NP_192209.2)
nucl 9,  cyto 1,  golg 1  (predict for NP_974504.1)
Subcellular
localization
TargetP
other 8,  chlo 5  (predict for NP_001329452.1)
other 8,  chlo 5  (predict for NP_001329453.1)
other 8,  chlo 5  (predict for NP_001329454.1)
other 8,  chlo 5  (predict for NP_001329455.1)
other 8,  chlo 5  (predict for NP_192209.2)
other 8,  chlo 5  (predict for NP_974504.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G03000 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT1G03365 RING/U-box superfamily protein [detail] 10723112
7.0 AT1G24560 paramyosin [detail] 839070
6.7 WEB1 WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827) [detail] 817198
5.6 SWN SET domain-containing protein [detail] 828165
5.6 MBD13 methyl-CPG-binding domain protein 13 [detail] 835299
4.8 AT5G66820 transmembrane protein [detail] 836816
Coexpressed
gene list		 [Coexpressed gene list for AT4G03000]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255466_at
255466_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255466_at
255466_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255466_at
255466_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828112      
Refseq ID (protein) NP_001329452.1 
NP_001329453.1 
NP_001329454.1 
NP_001329455.1 
NP_192209.2 
NP_974504.1 


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