[←][→] ath   AT4G22140 Gene
functional annotation
Function   PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein  
GO BP
GO:0009911 [list] [network] positive regulation of flower development  (40 genes)  IGI  
GO:0009845 [list] [network] seed germination  (93 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001031695.1  NP_001320030.1  NP_193945.2 
BLAST NP_001031695.1  NP_001320030.1  NP_193945.2 
Orthologous [Ortholog page] SHL1 (ath)  LOC4334444 (osa)  LOC4342595 (osa)  LOC4345596 (osa)  LOC4346950 (osa)  LOC7484543 (ppo)  LOC11422794 (mtr)  LOC25487270 (mtr)  LOC100193016 (zma)  LOC100217096 (zma)  LOC100252013 (vvi)  LOC100253455 (vvi)  LOC100284042 (zma)  LOC100285536 (zma)  LOC100286231 (zma)  LOC100526926 (gma)  LOC100778353 (gma)  LOC100787968 (gma)  LOC100800806 (gma)  LOC100800993 (gma)  LOC100810424 (gma)  LOC100854261 (vvi)  LOC101247139 (sly)  LOC101253288 (sly)  LOC101264075 (sly)  LOC103834239 (bra)  LOC103835144 (bra)  LOC103859811 (bra)  LOC103861289 (bra) 
Subcellular
localization
wolf
cyto 9  (predict for NP_001031695.1)
cyto 9  (predict for NP_001320030.1)
cyto 9  (predict for NP_193945.2)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001031695.1)
other 8,  mito 3  (predict for NP_001320030.1)
other 8,  mito 3  (predict for NP_193945.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 3
Genes directly connected with EBS on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 831923
6.3 EML3 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [detail] 831142
5.7 AT3G24860 Homeodomain-like superfamily protein [detail] 822084
5.1 AL1 alfin-like 1 [detail] 830444
Coexpressed
gene list		 [Coexpressed gene list for EBS]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254342_at
254342_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254342_at
254342_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254342_at
254342_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828303      
Refseq ID (protein) NP_001031695.1 
NP_001320030.1 
NP_193945.2 


The preparation time of this page was 0.1 [sec].