[←][→] ath   AT4G24560 Gene
functional annotation
Function   ubiquitin-specific protease 16  
GO BP
GO:1901000 [list] [network] regulation of response to salt stress  (25 genes)  IMP  
GO:0016579 [list] [network] protein deubiquitination  (48 genes)  IBA IDA  
GO:0048366 [list] [network] leaf development  (338 genes)  IGI  
GO:0051301 [list] [network] cell division  (352 genes)  IGI  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO:0009908 [list] [network] flower development  (447 genes)  IGI  
GO:0048364 [list] [network] root development  (482 genes)  IGI  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0048367 [list] [network] shoot system development  (812 genes)  IGI  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IBA  
GO:0036459 [list] [network] thiol-dependent ubiquitinyl hydrolase activity  (51 genes)  IDA  
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (66 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_567705.1 
BLAST NP_567705.1 
Orthologous [Ortholog page] UBP17 (ath)  LOC4345840 (osa)  LOC4347307 (osa)  LOC7486557 (ppo)  LOC11405494 (mtr)  LOC11429833 (mtr)  LOC11437133 (mtr)  LOC100257420 (vvi)  LOC100257775 (vvi)  LOC100277781 (zma)  LOC100782303 (gma)  LOC100792437 (gma)  LOC100793079 (gma)  LOC100795674 (gma)  LOC100811058 (gma)  LOC100815856 (gma)  LOC100853437 (vvi)  LOC101252175 (sly)  LOC103634170 (zma)  LOC103643160 (zma)  LOC103861492 (bra)  LOC103862275 (bra)  LOC103873979 (bra) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  cyto_nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_567705.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_567705.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with UBP16 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.9 AT5G07970 dentin sialophosphoprotein-like protein [detail] 830691
8.6 SUO protein SUO [detail] 823960
8.3 NUP1 nuclear pore complex protein [detail] 820234
6.0 ETR1 Signal transduction histidine kinase, hybrid-type, ethylene sensor [detail] 842951
5.9 AT1G24267 bZIP transcription factor, putative (DUF1664) [detail] 839042
5.7 MKP1 mitogen-activated protein kinase phosphatase 1 [detail] 824693
5.5 HSL1 HSI2-like 1 [detail] 829332
Coexpressed
gene list		 [Coexpressed gene list for UBP16]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254128_at
254128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254128_at
254128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254128_at
254128_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828558      
Refseq ID (protein) NP_567705.1 


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