ATTED-II : GeneID search result

[←][→] ath AT4G25580 Gene

functional annotation

Function

CAP160 protein

GO BP

GO:0009737 [list] [network] response to abscisic acid

(574 genes)

IEA

GO CC

GO:0009506 [list] [network] plasmodesma	(962 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

KEGG

Protein

NP_001328089.1 NP_194288.2

BLAST

NP_001328089.1 NP_194288.2

Orthologous

[Ortholog page] PM39 (gma) LTI65 (ath) LTI78 (ath) LOC7484381 (ppo) LOC25485071 (mtr) LOC25485072 (mtr) LOC25496346 (mtr) LOC100260796 (vvi) LOC100790856 (gma) LOC100791989 (gma) LOC100801440 (gma) LOC100806075 (gma) LOC100810490 (gma) LOC100813715 (gma) LOC101266908 (sly) LOC102660061 (gma) LOC103834864 (bra) LOC103852103 (bra) LOC103852107 (bra) LOC103857129 (bra) LOC103861574 (bra) LOC104649215 (sly) LOC106796485 (gma)

Subcellular
localization
wolf

nucl 9, cyto 1, vacu 1	(predict for NP_001328089.1)
nucl 9	(predict for NP_194288.2)

Subcellular
localization
TargetP

other 7, mito 3	(predict for NP_001328089.1)
other 7, mito 3	(predict for NP_194288.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G25580 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.1	BETA-TIP	beta-tonoplast intrinsic protein	[detail]	838359
6.1	AT2G42560	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	[detail]	818856
5.8	GEA6	Stress induced protein	[detail]	818608

Coexpressed
gene list

[Coexpressed gene list for AT4G25580]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245233_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245233_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245233_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	828663
Refseq ID (protein)	NP_001328089.1
Refseq ID (protein)	NP_194288.2

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