[←][→] ath   AT4G28760 Gene
functional annotation
Function   methyl-coenzyme M reductase II subunit gamma, putative (DUF3741)  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_567819.1  NP_974633.1 
BLAST NP_567819.1  NP_974633.1 
Orthologous [Ortholog page] TRM17 (ath)  TRM21 (ath)  LOC4329989 (osa)  LOC4336344 (osa)  LOC7459526 (ppo)  LOC11425227 (mtr)  LOC25484161 (mtr)  LOC100241277 (vvi)  LOC100278954 (zma)  LOC100787955 (gma)  LOC100793360 (gma)  LOC100814302 (gma)  LOC100816611 (gma)  TRM17/20b (sly)  TRM17/20a (sly)  LOC103646241 (zma)  LOC103839223 (bra)  LOC103854122 (bra)  LOC109943046 (zma) 
Subcellular
localization
wolf
nucl 9,  mito 1,  cysk 1  (predict for NP_567819.1)
nucl 9,  mito 1,  cysk 1  (predict for NP_974633.1)
Subcellular
localization
TargetP
other 6  (predict for NP_567819.1)
other 6  (predict for NP_974633.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRM20 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 TRM4 LONGIFOLIA protein [detail] 843756
5.4 AT1G72410 COP1-interacting protein-like protein [detail] 843573
5.4 AT1G48950 C3HC zinc finger-like protein [detail] 841317
4.0 AT1G21060 Serine/Threonine-kinase, putative (Protein of unknown function, DUF547) [detail] 838700
Coexpressed
gene list		 [Coexpressed gene list for TRM20]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253739_at
253739_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253739_at
253739_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253739_at
253739_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828997      
Refseq ID (protein) NP_567819.1 
NP_974633.1 


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