[←][→] ath   AT4G28890 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IDA IEA  
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_194618.3 
BLAST NP_194618.3 
Orthologous [Ortholog page] AT2G20030 (ath)  LOC4339820 (osa)  LOC7458782 (ppo)  LOC7471530 (ppo)  LOC11439998 (mtr)  LOC25490128 (mtr)  LOC100244010 (vvi)  LOC100249196 (vvi)  LOC100803207 (gma)  LOC100803881 (gma)  LOC100806950 (gma)  LOC100816668 (gma)  LOC101255561 (sly)  LOC103630821 (zma)  LOC103637047 (zma)  LOC103834742 (bra)  LOC103842617 (bra)  LOC103848774 (bra)  LOC103854017 (bra)  LOC103861858 (bra)  LOC104647381 (sly) 
Subcellular
localization
wolf
chlo 5,  extr 3,  vacu 1  (predict for NP_194618.3)
Subcellular
localization
TargetP
scret 4,  other 3  (predict for NP_194618.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G28890 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 PGSIP5 plant glycogenin-like starch initiation protein 5 [detail] 837420
5.7 AT1G61590 Protein kinase superfamily protein [detail] 842455
5.7 AT3G05920 Heavy metal transport/detoxification superfamily protein [detail] 819761
5.2 FLS3 flavonol synthase 3 [detail] 836478
4.6 NIC3 nicotinamidase 3 [detail] 832386
Coexpressed
gene list		 [Coexpressed gene list for AT4G28890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253741_at
253741_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253741_at
253741_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253741_at
253741_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829010      
Refseq ID (protein) NP_194618.3 


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