[←][→] ath   AT4G29160 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0070676 [list] [network] intralumenal vesicle formation  (5 genes)  IDA  
GO:0007034 [list] [network] vacuolar transport  (89 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (11 genes)  ISS  
GO:0010008 [list] [network] endosome membrane  (162 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001078468.1  NP_194645.1  NP_974635.1 
BLAST NP_001078468.1  NP_194645.1  NP_974635.1 
Orthologous [Ortholog page] SNF7.2 (ath)  LOC4346566 (osa)  LOC4349637 (osa)  LOC4351360 (osa)  LOC11413678 (mtr)  LOC25497002 (mtr)  LOC100191358 (zma)  LOC100191382 (zma)  LOC100242218 (vvi)  LOC100242412 (vvi)  LOC100258281 (vvi)  LOC100281033 (zma)  LOC100780154 (gma)  LOC100789724 (gma)  LOC100792607 (gma)  LOC100810464 (gma)  LOC101248169 (sly)  LOC101264627 (sly)  LOC101268300 (sly)  LOC103654298 (zma)  LOC103828275 (bra)  LOC103837985 (bra)  LOC103853808 (bra)  LOC103861874 (bra) 
Subcellular
localization
wolf
nucl 4,  nucl_plas 3,  chlo 2,  cyto 1,  mito 1  (predict for NP_001078468.1)
nucl 4,  nucl_plas 3,  chlo 2,  cyto 1,  mito 1  (predict for NP_194645.1)
nucl 4,  mito 4,  cyto 1,  chlo 1,  plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_974635.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078468.1)
other 8  (predict for NP_194645.1)
other 8  (predict for NP_974635.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04626 Plant-pathogen interaction 2
Genes directly connected with SNF7.1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT1G21080 DNAJ heat shock N-terminal domain-containing protein [detail] 838704
6.8 VPS2.1 SNF7 family protein [detail] 815211
6.8 VPS60.2 SNF7 family protein [detail] 830364
Coexpressed
gene list		 [Coexpressed gene list for SNF7.1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253735_at
253735_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253735_at
253735_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253735_at
253735_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829037      
Refseq ID (protein) NP_001078468.1 
NP_194645.1 
NP_974635.1 


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