[←][→] ath   AT4G30860 Gene
functional annotation
Function   SET domain group 4  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IBA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (160 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0046975 [list] [network] histone methyltransferase activity (H3-K36 specific)  (6 genes)  IBA  
GO:0042054 [list] [network] histone methyltransferase activity  (47 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_567859.1 
BLAST NP_567859.1 
Orthologous [Ortholog page] LOC4329956 (osa)  LOC7489421 (ppo)  LOC25480139 (mtr)  LOC100194312 (zma)  LOC100241513 (vvi)  LOC100791481 (gma)  LOC101249099 (sly)  LOC103834651 (bra) 
Subcellular
localization
wolf
nucl 7,  cysk 1,  chlo 1,  plas 1  (predict for NP_567859.1)
Subcellular
localization
TargetP
scret 5  (predict for NP_567859.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 2
Genes directly connected with SDG4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.4 BARD1 breast cancer associated RING 1 [detail] 839329
11.8 AT3G02820 zinc knuckle (CCHC-type) family protein [detail] 821018
11.1 ABAP1 ARMADILLO BTB protein 1 [detail] 831145
11.0 AT4G26960 hypothetical protein [detail] 828803
Coexpressed
gene list		 [Coexpressed gene list for SDG4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253599_at
253599_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253599_at
253599_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253599_at
253599_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829210      
Refseq ID (protein) NP_567859.1 


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