ATTED-II : GeneID search result

[←][→] ath AT4G30900 Gene

functional annotation

Function

DNAse I-like superfamily protein

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0000175 [list] [network] 3'-5'-exoribonuclease activity

(32 genes)

IBA

KEGG

Protein

NP_001119082.1 NP_001329622.1 NP_194819.3

BLAST

NP_001119082.1 NP_001329622.1 NP_194819.3

Orthologous

[Ortholog page] LOC4338286 (osa) LOC11427115 (mtr) LOC100263811 (vvi) LOC100277740 (zma) LOC100783799 (gma) LOC100784843 (gma) LOC101268290 (sly) LOC103641526 (zma) LOC103852248 (bra)

Subcellular
localization
wolf

nucl 6, cyto 1, plas 1, extr 1, cysk 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1	(predict for NP_001119082.1)
nucl 6, cyto 1, plas 1, extr 1, cysk 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1	(predict for NP_001329622.1)
nucl 6, cyto 1, plas 1, extr 1, cysk 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1	(predict for NP_194819.3)

Subcellular
localization
TargetP

other 7, chlo 3	(predict for NP_001119082.1)
other 7, chlo 3	(predict for NP_001329622.1)
other 7, chlo 3	(predict for NP_194819.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G30900 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.8	TAF6B	TBP-ASSOCIATED FACTOR 6B	[detail]	841877
5.7	AT2G04540	Beta-ketoacyl synthase	[detail]	814996
5.5	AT4G17150	alpha/beta-Hydrolases superfamily protein	[detail]	827425
5.5	AT2G21630	Sec23/Sec24 protein transport family protein	[detail]	816701

Coexpressed
gene list

[Coexpressed gene list for AT4G30900]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253601_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253601_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253601_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829214
Refseq ID (protein)	NP_001119082.1
	NP_001329622.1
	NP_194819.3

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