[←][→] ath   AT4G31200 Gene
functional annotation
Function   SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein  
GO BP
GO:0006874 [list] [network] cellular calcium ion homeostasis  (51 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (831 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_001320099.1  NP_194848.1  NP_974650.1 
BLAST NP_001320099.1  NP_194848.1  NP_974650.1 
Orthologous [Ortholog page] LOC9266375 (osa)  LOC11415192 (mtr)  LOC100216800 (zma)  LOC100253849 (vvi)  LOC100255482 (vvi)  LOC100802329 (gma)  LOC100816468 (gma)  LOC101253640 (sly)  LOC103852032 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001320099.1)
nucl 9  (predict for NP_194848.1)
nucl 9  (predict for NP_974650.1)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for NP_001320099.1)
mito 7,  other 5  (predict for NP_194848.1)
mito 7,  other 5  (predict for NP_974650.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT4G31200 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 AT2G28240 ATP-dependent helicase family protein [detail] 817370
8.4 TAF12 TBP-associated factor 12 [detail] 820168
7.8 AT3G26990 ENTH/VHS family protein [detail] 822316
7.6 AT1G62970 Chaperone DnaJ-domain superfamily protein [detail] 842599
7.1 FRS8 FAR1-related sequence 8 [detail] 844341
6.9 AT4G03120 C2H2 and C2HC zinc fingers superfamily protein [detail] 828071
6.8 HUA1 floral homeotic protein (HUA1) [detail] 820448
6.6 AT5G10060 ENTH/VHS family protein [detail] 830870
6.6 AT5G65540 transcription initiation factor TFIID subunit [detail] 836680
5.9 MAC5B CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein [detail] 817507
5.3 AT2G01630 O-Glycosyl hydrolases family 17 protein [detail] 814692
5.2 FRS5 FAR1-related sequence 5 [detail] 829974
5.0 AT5G41580 RING/U-box superfamily protein [detail] 834160
4.7 AT3G62200 Putative endonuclease or glycosyl hydrolase [detail] 825393
Coexpressed
gene list		 [Coexpressed gene list for AT4G31200]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253565_at
253565_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253565_at
253565_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253565_at
253565_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829247      
Refseq ID (protein) NP_001320099.1 
NP_194848.1 
NP_974650.1 


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