[←][→] ath   AT4G31720 Gene
functional annotation
Function   TBP-associated factor II 15  
GO BP
GO:0006352 [list] [network] DNA-templated transcription, initiation  (56 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_001329548.1  NP_194900.1  NP_849481.1 
BLAST NP_001329548.1  NP_194900.1  NP_849481.1 
Orthologous [Ortholog page] LOC4347127 (osa)  LOC7465449 (ppo)  LOC11432171 (mtr)  LOC100247660 (vvi)  LOC100264817 (vvi)  LOC100281967 (zma)  LOC100500618 (gma)  LOC100809339 (gma)  LOC101254982 (sly)  LOC103834594 (bra)  LOC103851590 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_001329548.1)
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_194900.1)
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_849481.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001329548.1)
other 9  (predict for NP_194900.1)
other 9  (predict for NP_849481.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 2
Genes directly connected with TAFII15 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 AT2G31440 gamma-secretase subunit APH1-like protein [detail] 817702
6.9 SCL30 SC35-like splicing factor 30 [detail] 824712
6.7 HTA9 histone H2A protein 9 [detail] 841707
Coexpressed
gene list		 [Coexpressed gene list for TAFII15]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253484_at
253484_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253484_at
253484_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253484_at
253484_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829300      
Refseq ID (protein) NP_001329548.1 
NP_194900.1 
NP_849481.1 


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