[←][→] ath   AT4G31880 Gene
functional annotation
Function   transcriptional regulator  
GO BP
GO:0009556 [list] [network] microsporogenesis  (24 genes)  IGI  
GO:0006281 [list] [network] DNA repair  (295 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA RCA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001190882.1  NP_194916.2 
BLAST NP_001190882.1  NP_194916.2 
Orthologous [Ortholog page] AT1G15940 (ath)  AT1G80810 (ath)  LOC4329966 (osa)  LOC4335488 (osa)  LOC4336311 (osa)  LOC7487059 (ppo)  LOC7493222 (ppo)  LOC7493403 (ppo)  LOC9266945 (osa)  LOC11423336 (mtr)  LOC11437017 (mtr)  LOC11442229 (mtr)  LOC25491183 (mtr)  LOC100248351 (vvi)  LOC100260975 (vvi)  LOC100383153 (zma)  LOC100527580 (gma)  LOC100781036 (gma)  LOC100790092 (gma)  LOC100809147 (gma)  LOC100812058 (gma)  LOC100818050 (gma)  LOC101246231 (sly)  LOC101250849 (sly)  LOC101253678 (sly)  LOC101253990 (sly)  LOC101268581 (sly)  LOC102665410 (gma)  LOC102670509 (gma)  LOC103641817 (zma)  LOC103646255 (zma)  LOC103653756 (zma)  LOC103654690 (zma)  LOC103830458 (bra)  LOC103832454 (bra)  LOC103836009 (bra)  LOC103842872 (bra)  LOC103851468 (bra)  LOC103862094 (bra)  LOC103868337 (bra)  LOC103872394 (bra)  LOC104646574 (sly)  LOC104880340 (vvi)  LOC104880341 (vvi)  LOC104880363 (vvi)  B12 (gma)  LOC106799206 (gma) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001190882.1)
nucl 9  (predict for NP_194916.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001190882.1)
other 9  (predict for NP_194916.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G31880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.1 AT5G46070 Guanylate-binding family protein [detail] 834648
11.8 LINC4 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5);little nuclei4 [detail] 836706
10.3 AT3G54760 dentin sialophosphoprotein-like protein [detail] 824641
10.0 AT1G15940 Tudor/PWWP/MBT superfamily protein [detail] 838164
9.0 SPT16 global transcription factor C [detail] 826665
9.0 LINC1 little nuclei1 [detail] 843043
8.3 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein [detail] 816247
7.4 ARP5 actin-related protein 5 [detail] 820416
7.2 AT5G13560 structural maintenance of chromosomes protein [detail] 831200
7.1 CHB3 DNA-binding family protein [detail] 829594
6.9 AT1G30470 SIT4 phosphatase-associated family protein [detail] 839926
6.6 UBP26 ubiquitin-specific protease 26 [detail] 824122
6.1 AT1G54610 Protein kinase superfamily protein [detail] 841903
6.0 AT3G02890 RING/FYVE/PHD zinc finger superfamily protein [detail] 821192
6.0 AT3G52100 RING/FYVE/PHD-type zinc finger family protein [detail] 824373
5.5 XPB2 homolog of Xeroderma pigmentosum complementation group B 2 [detail] 834138
Coexpressed
gene list		 [Coexpressed gene list for AT4G31880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253497_at
253497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253497_at
253497_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253497_at
253497_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829318      
Refseq ID (protein) NP_001190882.1 
NP_194916.2 


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