[←][→] ath   AT4G35740 Gene
functional annotation
Function   DEAD/DEAH box RNA helicase family protein  
GO BP
GO:0006268 [list] [network] DNA unwinding involved in DNA replication  (18 genes)  IBA  
GO:0032508 [list] [network] DNA duplex unwinding  (29 genes)  IBA IDA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IBA  
GO:0006310 [list] [network] DNA recombination  (143 genes)  IBA IDA  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA  
GO CC
GO:0005694 [list] [network] chromosome  (348 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0036310 [list] [network] annealing helicase activity  (2 genes)  IDA  
GO:0009378 [list] [network] four-way junction helicase activity  (7 genes)  IBA IDA  
GO:0043138 [list] [network] 3'-5' DNA helicase activity  (11 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_195299.2  NP_849500.1 
BLAST NP_195299.2  NP_849500.1 
Orthologous [Ortholog page] LOC4330923 (osa)  LOC11446659 (mtr)  LOC100242171 (vvi)  LOC100280239 (zma)  LOC100819601 (gma)  LOC101250424 (sly)  LOC103834937 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  nucl_plas 2,  E.R. 1,  cyto_plas 1  (predict for NP_195299.2)
nucl 8,  cyto 2  (predict for NP_849500.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_195299.2)
other 8  (predict for NP_849500.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 3
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
Genes directly connected with RecQl3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 APC7 tetratricopeptide repeat (TPR)-containing protein [detail] 818495
6.0 GC4 golgin Putative 4 [detail] 819225
5.9 PARP1 poly(ADP-ribose) polymerase 2 [detail] 817690
5.7 ATRAD17 RADIATION SENSITIVE 17 [detail] 836745
5.0 AT5G50330 Protein kinase superfamily protein [detail] 835099
4.9 AT4G32970 BRISC/BRCA1-A complex protein [detail] 829434
Coexpressed
gene list		 [Coexpressed gene list for RecQl3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
253157_at
253157_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
253157_at
253157_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
253157_at
253157_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 829727      
Refseq ID (protein) NP_195299.2 
NP_849500.1 


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