ATTED-II : GeneID search result

[←][→] ath AT4G35790 Gene

functional annotation

Function

phospholipase D delta

GO BP

GO:0046473 [list] [network] phosphatidic acid metabolic process	(5 genes)	IMP
GO:0046470 [list] [network] phosphatidylcholine metabolic process	(18 genes)	IEA
GO:0090333 [list] [network] regulation of stomatal closure	(26 genes)	IMP
GO:0009789 [list] [network] positive regulation of abscisic acid-activated signaling pathway	(40 genes)	IMP
GO:0012501 [list] [network] programmed cell death	(106 genes)	IMP
GO:0016042 [list] [network] lipid catabolic process	(239 genes)	IEA
GO:0009409 [list] [network] response to cold	(411 genes)	IEP IMP

GO CC

GO:0009506 [list] [network] plasmodesma	(962 genes)	IDA
GO:0005773 [list] [network] vacuole	(1133 genes)	IDA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	HDA IDA

GO MF

GO:0004630 [list] [network] phospholipase D activity	(12 genes)	IDA IMP ISS
GO:0070290 [list] [network] N-acylphosphatidylethanolamine-specific phospholipase D activity	(12 genes)	IEA
GO:0005509 [list] [network] calcium ion binding	(242 genes)	IEA

KEGG

ath00564 [list] [network] Glycerophospholipid metabolism (96 genes)

ath00565 [list] [network] Ether lipid metabolism (26 genes)

ath04144 [list] [network] Endocytosis (144 genes)

Protein

NP_567989.1 NP_849501.1 NP_849502.1

BLAST

NP_567989.1 NP_849501.1 NP_849502.1

Orthologous

[Ortholog page] LOC4334732 (osa) LOC4342872 (osa) LOC4347745 (osa) LOC7480751 (ppo) LOC7485622 (ppo) LOC9266665 (osa) LOC11414625 (mtr) LOC11430291 (mtr) LOC11436144 (mtr) LOC100217111 (zma) LOC100241982 (vvi) LOC100252422 (vvi) LOC100261019 (vvi) LOC100779740 (gma) LOC100789389 (gma) LOC100795859 (gma) LOC100801787 (gma) LOC100810824 (gma) LOC100814486 (gma) LOC101246303 (sly) LOC101248969 (sly) LOC101256058 (sly) LOC101260675 (sly) LOC101264680 (sly) LOC103626543 (zma) LOC103647321 (zma) LOC103647629 (zma) LOC103833297 (bra) LOC103834928 (bra) LOC103862436 (bra) LOC103873479 (bra)

Subcellular
localization
wolf

cysk 4, cysk_plas 3, nucl 2, cyto 1, chlo 1, pero 1, cyto_E.R. 1	(predict for NP_567989.1)
cysk 3, nucl 3, cysk_plas 2, chlo 1, cyto 1	(predict for NP_849501.1)
cysk 3, cyto 3, nucl 2, cysk_plas 2, chlo 1, pero 1	(predict for NP_849502.1)

Subcellular
localization
TargetP

other 7	(predict for NP_567989.1)
other 7	(predict for NP_849501.1)
other 7	(predict for NP_849502.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00010	Glycolysis / Gluconeogenesis	3
ath04144	Endocytosis	3
ath00052	Galactose metabolism	2
ath00230	Purine metabolism	2
ath00500	Starch and sucrose metabolism	2

Genes directly connected with PLDDELTA on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.0	AT4G02480	AAA-type ATPase family protein	[detail]	827979
5.1	EXO84B	exocyst complex component 84B	[detail]	835046
5.1	RAN1	copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)	[detail]	834509
4.3	HXK2	hexokinase 2	[detail]	816505

Coexpressed
gene list

[Coexpressed gene list for PLDDELTA]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

253120_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

253120_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

253120_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	829733
Refseq ID (protein)	NP_567989.1
	NP_849501.1
	NP_849502.1

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