[←][→] ath   AT4G38510 Gene
functional annotation
Function   ATPase, V1 complex, subunit B protein  
GO BP
GO:0030835 [list] [network] negative regulation of actin filament depolymerization  (13 genes)  IDA  
GO:0051693 [list] [network] actin filament capping  (13 genes)  IDA  
GO:0051017 [list] [network] actin filament bundle assembly  (20 genes)  IDA  
GO:1902600 [list] [network] proton transmembrane transport  (66 genes)  IEA  
GO:0046034 [list] [network] ATP metabolic process  (112 genes)  IEA  
GO CC
GO:0033180 [list] [network] proton-transporting V-type ATPase, V1 domain  (7 genes)  IEA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA IEA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA ISM  
GO MF
GO:0051015 [list] [network] actin filament binding  (47 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0016787 [list] [network] hydrolase activity  (3024 genes)  IEA  
KEGG ath00190 [list] [network] Oxidative phosphorylation (142 genes)
ath04145 [list] [network] Phagosome (82 genes)
Protein NP_001031807.1  NP_001031808.1  NP_001190954.1  NP_195563.1  NP_974707.1 
BLAST NP_001031807.1  NP_001031808.1  NP_001190954.1  NP_195563.1  NP_974707.1 
Orthologous [Ortholog page] VAB3 (ath)  VAB1 (ath)  LOC4327833 (osa)  LOC4341339 (osa)  LOC7470417 (ppo)  LOC7474990 (ppo)  LOC11426878 (mtr)  LOC25485635 (mtr)  LOC100243574 (vvi)  LOC100257413 (vvi)  LOC100282598 (zma)  LOC100286306 (zma)  LOC100791429 (gma)  LOC100793764 (gma)  LOC100804483 (gma)  LOC100814088 (gma)  LOC101244132 (sly)  LOC101245703 (sly)  LOC103829438 (bra)  LOC103832047 (bra)  LOC103872821 (bra)  LOC108869119 (bra) 
Subcellular
localization
wolf
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_001031807.1)
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_001031808.1)
cyto 8,  chlo 1,  mito 1,  E.R. 1,  chlo_mito 1  (predict for NP_001190954.1)
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_195563.1)
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_974707.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031807.1)
other 8  (predict for NP_001031808.1)
other 8  (predict for NP_001190954.1)
other 8  (predict for NP_195563.1)
other 8  (predict for NP_974707.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
ath04145 Phagosome 8
ath01200 Carbon metabolism 8
ath00010 Glycolysis / Gluconeogenesis 6
ath00620 Pyruvate metabolism 6
Genes directly connected with VAB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 VHA-A vacuolar ATP synthase subunit A [detail] 844228
8.5 AT3G42050 vacuolar ATP synthase subunit H family protein [detail] 823170
7.9 AT3G13930 Dihydrolipoamide acetyltransferase, long form protein [detail] 820606
Coexpressed
gene list		 [Coexpressed gene list for VAB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252998_at
252998_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252998_at
252998_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252998_at
252998_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830008      
Refseq ID (protein) NP_001031807.1 
NP_001031808.1 
NP_001190954.1 
NP_195563.1 
NP_974707.1 


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