[←][→] ath   AT4G38600 Gene
functional annotation
Function   HECT ubiquitin protein ligase family protein KAK  
GO BP
GO:0042023 [list] [network] DNA endoreduplication  (21 genes)  IMP  
GO:0010091 [list] [network] trichome branching  (28 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0016874 [list] [network] ligase activity  (232 genes)  IEA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA ISS  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001329354.1  NP_195572.2  NP_849567.2 
BLAST NP_001329354.1  NP_195572.2  NP_849567.2 
Orthologous [Ortholog page] LOC4327983 (osa)  LOC11439680 (mtr)  LOC100264024 (vvi)  LOC100783336 (gma)  LOC100804501 (gma)  LOC101247472 (sly)  LOC101264868 (sly)  LOC103626504 (zma)  LOC103646651 (zma)  LOC103835175 (bra) 
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  cyto 1,  plas 1,  cysk 1  (predict for NP_001329354.1)
nucl 3,  nucl_plas 2,  cyto 2,  chlo 1,  cysk 1,  cyto_E.R. 1  (predict for NP_195572.2)
nucl 6,  nucl_plas 4,  cyto 1,  plas 1,  cysk 1  (predict for NP_849567.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001329354.1)
other 8  (predict for NP_195572.2)
chlo 9  (predict for NP_849567.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03040 Spliceosome 2
Genes directly connected with KAK on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.8 UPL2 ubiquitin-protein ligase 2 [detail] 843368
14.8 RAPTOR1 Regulatory-associated protein of TOR 1 [detail] 820032
14.7 GRV2 DNAJ heat shock N-terminal domain-containing protein [detail] 817230
14.3 CCT RNA polymerase II transcription mediator [detail] 827954
12.9 AT3G50370 hypothetical protein [detail] 824199
11.9 EMB2016 embryo defective 2016 [detail] 819736
11.9 NRPB1 RNA polymerase II large subunit [detail] 829734
11.9 LBA1 RNA helicase [detail] 834747
10.4 AT3G11960 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [detail] 820369
9.8 AT2G48160 Tudor/PWWP/MBT domain-containing protein [detail] 819428
9.6 AT3G33530 Transducin family protein / WD-40 repeat family protein [detail] 823149
9.3 NRB4 mediator of RNA polymerase II transcription subunit 15a-like protein [detail] 838147
9.1 KEG protein kinases;ubiquitin-protein ligase [detail] 831197
8.6 AT3G06480 DEAD box RNA helicase family protein [detail] 819825
7.7 XRN3 5'-3' exoribonuclease 3 [detail] 843900
7.3 TPR2 TOPLESS-related 2 [detail] 820936
7.1 AT5G11700 ephrin type-B receptor [detail] 831042
Coexpressed
gene list		 [Coexpressed gene list for KAK]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252948_at
252948_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252948_at
252948_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252948_at
252948_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830017      
Refseq ID (protein) NP_001329354.1 
NP_195572.2 
NP_849567.2 


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