[←][→] ath   AT4G38760 Gene
functional annotation
Function   nucleoporin (DUF3414)  
GO BP
GO:0006606 [list] [network] protein import into nucleus  (47 genes)  IBA  
GO CC
GO:0044611 [list] [network] nuclear pore inner ring  (3 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IBA  
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_195587.5 
BLAST NP_195587.5 
Orthologous [Ortholog page] LOC9269589 (osa)  LOC11442832 (mtr)  LOC100264071 (vvi)  LOC100279122 (zma)  LOC100796560 (gma)  LOC101245721 (sly)  LOC103828087 (bra) 
Subcellular
localization
wolf
plas 6,  nucl 2,  cyto 1  (predict for NP_195587.5)
Subcellular
localization
TargetP
other 8  (predict for NP_195587.5)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
Genes directly connected with AT4G38760 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 EFS histone-lysine N-methyltransferase [detail] 844066
9.3 LDL3 LSD1-like 3 [detail] 827325
8.6 UPL2 ubiquitin-protein ligase 2 [detail] 843368
7.6 DWA3 Transducin/WD40 repeat-like superfamily protein [detail] 842414
7.4 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein [detail] 843798
7.3 PHYLLO 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein [detail] 843222
Coexpressed
gene list		 [Coexpressed gene list for AT4G38760]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252961_at
252961_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252961_at
252961_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252961_at
252961_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830031      
Refseq ID (protein) NP_195587.5 


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