[←][→] ath   AT5G04430 Gene
functional annotation
Function   binding to TOMV RNA 1L (long form)  
GO BP
GO:0046719 [list] [network] regulation by virus of viral protein levels in host cell  (1 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  NAS  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (64 genes)  IPI  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG
Protein NP_196063.1  NP_850764.1 
BLAST NP_196063.1  NP_850764.1 
Orthologous [Ortholog page] LOC542422 (zma)  LOC4331186 (osa)  LOC7463468 (ppo)  LOC25484838 (mtr)  LOC100258231 (vvi)  LOC100273088 (zma)  LOC100783639 (gma)  LOC100806669 (gma)  LOC101260890 (sly)  LOC101266125 (sly)  LOC103847291 (bra)  LOC103850545 (bra)  LOC103855571 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for NP_196063.1)
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for NP_850764.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for NP_196063.1)
other 7,  chlo 4  (predict for NP_850764.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00061 Fatty acid biosynthesis 7
ath01212 Fatty acid metabolism 7
ath00780 Biotin metabolism 4
ath00620 Pyruvate metabolism 3
ath01200 Carbon metabolism 3
Genes directly connected with BTR1L on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 EMB3147 EMBRYO DEFECTIVE 3147 [detail] 817570
5.9 APY2 apyrase 2 [detail] 831946
5.7 KASI 3-ketoacyl-acyl carrier protein synthase I [detail] 834671
Coexpressed
gene list		 [Coexpressed gene list for BTR1L]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250843_at
250843_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250843_at
250843_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250843_at
250843_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830322      
Refseq ID (protein) NP_196063.1 
NP_850764.1 


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