[←][→] ath   AT5G04850 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0007034 [list] [network] vacuolar transport  (89 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0032585 [list] [network] multivesicular body membrane  (7 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001190228.1  NP_568143.1 
BLAST NP_001190228.1  NP_568143.1 
Orthologous
Subcellular
localization
wolf
chlo 4,  E.R. 2,  mito 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_001190228.1)
mito 4,  nucl 3,  nucl_plas 2,  chlo 1,  plas 1  (predict for NP_568143.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190228.1)
other 8  (predict for NP_568143.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
Genes directly connected with VPS60.2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 ATARD2 RmlC-like cupins superfamily protein [detail] 827122
6.8 SNF7.1 SNF7 family protein [detail] 829037
6.2 TDX tetraticopeptide domain-containing thioredoxin [detail] 821056
5.7 AT4G39870 TLD-domain containing nucleolar protein [detail] 830146
5.4 AT2G18600 Ubiquitin-conjugating enzyme family protein [detail] 816375
4.4 AT1G23780 F-box family protein [detail] 838989
Coexpressed
gene list		 [Coexpressed gene list for VPS60.2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246953_at
246953_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246953_at
246953_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246953_at
246953_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830364      
Refseq ID (protein) NP_001190228.1 
NP_568143.1 


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