[←][→] ath   AT5G04940 Gene
functional annotation
Function   SU(VAR)3-9 homolog 1  
GO BP
GO:0034968 [list] [network] histone lysine methylation  (36 genes)  IEA  
GO:0040029 [list] [network] regulation of gene expression, epigenetic  (210 genes)  TAS  
GO CC
GO:0000775 [list] [network] chromosome, centromeric region  (55 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0010385 [list] [network] double-stranded methylated DNA binding  (8 genes)  IDA  
GO:0031490 [list] [network] chromatin DNA binding  (27 genes)  IDA  
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific  (36 genes)  IDA  
GO:0018024 [list] [network] histone-lysine N-methyltransferase activity  (39 genes)  IEA  
GO:0042054 [list] [network] histone methyltransferase activity  (47 genes)  IDA ISS  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00310 [list] [network] Lysine degradation (38 genes)
Protein NP_196113.1  NP_850767.1 
BLAST NP_196113.1  NP_850767.1 
Orthologous [Ortholog page] LOC541980 (zma)  LOC542085 (zma)  LOC542102 (zma)  SUVH3 (ath)  LOC4327359 (osa)  LOC4339168 (osa)  LOC7463781 (ppo)  LOC11414786 (mtr)  LOC25488531 (mtr)  LOC25501124 (mtr)  LOC100262508 (vvi)  LOC100263685 (vvi)  LOC100786650 (gma)  LOC100800651 (gma)  LOC100805932 (gma)  LOC100812173 (gma)  LOC100817062 (gma)  LOC101243931 (sly)  LOC101258606 (sly)  LOC103650383 (zma)  LOC103831449 (bra)  LOC103831798 (bra)  LOC103847241 (bra)  LOC103847242 (bra)  LOC103850565 (bra)  LOC103855596 (bra)  LOC107277010 (osa)  LOC107277287 (osa) 
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for NP_196113.1)
nucl 9,  cyto 1  (predict for NP_850767.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_196113.1)
other 8,  mito 4  (predict for NP_850767.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SUVH1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 REF6 relative of early flowering 6 [detail] 824002
5.3 RECQ4A DNA helicase (RECQl4A) [detail] 837636
5.0 AT1G26370 RNA helicase family protein [detail] 839179
Coexpressed
gene list		 [Coexpressed gene list for SUVH1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250817_at
250817_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250817_at
250817_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250817_at
250817_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830376      
Refseq ID (protein) NP_196113.1 
NP_850767.1 


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