ATTED-II : GeneID search result

[←][→] ath AT5G05950 Gene

functional annotation

Function

maternal effect embryo arrest 60

GO BP

GO:0009793 [list] [network] embryo development ending in seed dormancy

(547 genes)

IMP

GO CC

GO:0016021 [list] [network] integral component of membrane

(4803 genes)

IEA

GO MF

KEGG

Protein

NP_196214.1

BLAST

NP_196214.1

Orthologous

[Ortholog page] LOC4342807 (osa) LOC7468603 (ppo) LOC7490359 (ppo) LOC11406134 (mtr) LOC25492549 (mtr) LOC100251250 (vvi) LOC100276832 (zma) LOC100787928 (gma) LOC100788464 (gma) LOC100798297 (gma) LOC100808626 (gma) LOC101248485 (sly) LOC103846941 (bra) LOC104879541 (vvi)

Subcellular
localization
wolf

vacu 9

(predict for NP_196214.1)

Subcellular
localization
TargetP

scret 6, other 3

(predict for NP_196214.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with MEE60 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.4	AT4G29870	Oligosaccharyltransferase complex/magnesium transporter family protein	[detail]	829109
7.5	AT5G51510	jagunal-like protein	[detail]	835225
7.0	AT5G40190	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[detail]	834017
6.8	AT5G65520	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	836678
5.0	SLY1	F-box family protein	[detail]	828522
4.0	SELT	SELT-like protein precursor	[detail]	823884

Coexpressed
gene list

[Coexpressed gene list for MEE60]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250707_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250707_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250707_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830480
Refseq ID (protein)	NP_196214.1

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