[←][→] ath   AT5G07250 Gene
functional annotation
Function   RHOMBOID-like protein 3  
GO BP
GO:0006508 [list] [network] proteolysis  (901 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (93 genes)  IEA  
KEGG
Protein NP_001119182.1  NP_196342.1 
BLAST NP_001119182.1  NP_196342.1 
Orthologous [Ortholog page] RBL6 (ath)  RBL2 (ath)  LOC4331402 (osa)  LOC4336706 (osa)  LOC4346228 (osa)  LOC4347634 (osa)  LOC4349148 (osa)  LOC7454498 (ppo)  LOC7465843 (ppo)  LOC11412678 (mtr)  LOC25499980 (mtr)  LOC100194066 (zma)  LOC100241085 (vvi)  LOC100241825 (vvi)  LOC100272312 (zma)  LOC100274505 (zma)  LOC100283507 (zma)  LOC100784224 (gma)  LOC100809265 (gma)  LOC101268211 (sly)  LOC101268356 (sly)  LOC103654435 (zma)  LOC103838299 (bra)  LOC103838340 (bra)  LOC103847074 (bra)  LOC103855721 (bra)  LOC103871983 (bra)  LOC109939190 (zma) 
Subcellular
localization
wolf
cyto 6,  mito 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  cyto_mito 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_001119182.1)
cyto 6,  plas 1,  mito 1,  E.R. 1,  pero 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1  (predict for NP_196342.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001119182.1)
other 9  (predict for NP_196342.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
ath04145 Phagosome 4
Genes directly connected with RBL3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein [detail] 840134
5.7 AVA-P2 ATPase, F0/V0 complex, subunit C protein [detail] 838579
5.7 AVA-P4 vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 [detail] 843898
5.4 AT5G16550 voltage-dependent L-type calcium channel subunit [detail] 831517
4.2 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 827383
Coexpressed
gene list		 [Coexpressed gene list for RBL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250621_at
250621_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250621_at
250621_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250621_at
250621_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830616      
Refseq ID (protein) NP_001119182.1 
NP_196342.1 


The preparation time of this page was 0.2 [sec].