[←][→] ath   AT5G08390 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:0051013 [list] [network] microtubule severing  (4 genes)  IGI  
GO:0043622 [list] [network] cortical microtubule organization  (34 genes)  IGI  
GO CC
GO:0008352 [list] [network] katanin complex  (5 genes)  IBA IPI  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008568 [list] [network] microtubule-severing ATPase activity  (5 genes)  IBA  
KEGG
Protein NP_568194.2 
BLAST NP_568194.2 
Orthologous [Ortholog page] AT5G23430 (ath)  LOC4337408 (osa)  LOC7468474 (ppo)  LOC7497764 (ppo)  LOC25495081 (mtr)  LOC100262947 (vvi)  LOC100784946 (gma)  LOC100788097 (gma)  LOC101249258 (sly)  LOC101258313 (sly)  LOC103642198 (zma)  LOC103645759 (zma)  LOC103855783 (bra)  LOC103865498 (bra)  LOC103874217 (bra)  LOC103874218 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_568194.2)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_568194.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G08390 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 PIR121 transcription activator [detail] 831959
6.9 AT4G38120 ARM repeat superfamily protein [detail] 829968
6.7 CLUB CLUB [detail] 835532
5.7 ASHH3 histone-lysine N-methyltransferase ASHH3 [detail] 819021
5.3 PC-MYB1 Homeodomain-like protein [detail] 829409
4.9 CPK13 calcium-dependent protein kinase 13 [detail] 824348
Coexpressed
gene list		 [Coexpressed gene list for AT5G08390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246056_at
246056_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246056_at
246056_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246056_at
246056_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830737      
Refseq ID (protein) NP_568194.2 


The preparation time of this page was 0.2 [sec].