[←][→] ath   AT5G08450 Gene
functional annotation
Function   zinc finger CCCH domain protein  
GO BP
GO:0080186 [list] [network] developmental vegetative growth  (10 genes)  IMP  
GO:1902074 [list] [network] response to salt  (20 genes)  IMP  
GO:0016575 [list] [network] histone deacetylation  (33 genes)  IDA  
GO:0009845 [list] [network] seed germination  (93 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001031857.1  NP_196462.2  NP_851033.1 
BLAST NP_001031857.1  NP_196462.2  NP_851033.1 
Orthologous [Ortholog page] LOC4343221 (osa)  LOC11418356 (mtr)  LOC25484514 (mtr)  LOC100216933 (zma)  LOC100259729 (vvi)  LOC100279228 (zma)  LOC100775559 (gma)  LOC100795503 (gma)  LOC100798761 (gma)  LOC100819424 (gma)  LOC101245846 (sly)  LOC103855788 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001031857.1)
nucl 9,  cyto_nucl 5  (predict for NP_196462.2)
nucl 9,  cyto_nucl 5  (predict for NP_851033.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001031857.1)
other 8,  chlo 3  (predict for NP_196462.2)
other 8,  chlo 3  (predict for NP_851033.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT5G08450 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.0 GTA2 global transcription factor group A2 [detail] 826391
9.3 AT5G55660 DEK domain-containing chromatin associated protein [detail] 835660
8.5 ELF8 binding protein [detail] 815177
7.5 SWI3C SWITCH/sucrose nonfermenting 3C [detail] 838774
Coexpressed
gene list		 [Coexpressed gene list for AT5G08450]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246059_at
246059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246059_at
246059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246059_at
246059_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830744      
Refseq ID (protein) NP_001031857.1 
NP_196462.2 
NP_851033.1 


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