ATTED-II : GeneID search result

[←][→] ath AT5G08580 Gene

functional annotation

Function

Calcium-binding EF hand family protein

GO BP

GO CC

GO:0005783 [list] [network] endoplasmic reticulum	(877 genes)	IBA IDA
GO:0005794 [list] [network] Golgi apparatus	(1430 genes)	IDA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

GO:0005509 [list] [network] calcium ion binding

(242 genes)

IBA

KEGG

Protein

NP_001332577.1 NP_568202.1

BLAST

NP_001332577.1 NP_568202.1

Orthologous

[Ortholog page] LOC4326305 (osa) LOC4328760 (osa) LOC7457157 (ppo) LOC7486353 (ppo) LOC11419916 (mtr) LOC25485668 (mtr) LOC100262960 (vvi) LOC100273329 (zma) LOC100273434 (zma) LOC100777260 (gma) LOC100808739 (gma) LOC101260524 (sly) LOC103847172 (bra) LOC103855805 (bra)

Subcellular
localization
wolf

extr 4, vacu 2, chlo 1, E.R._vacu 1	(predict for NP_001332577.1)
extr 4, vacu 2, chlo 1, E.R._vacu 1	(predict for NP_568202.1)

Subcellular
localization
TargetP

scret 6	(predict for NP_001332577.1)
scret 6	(predict for NP_568202.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G08580 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.7	TSO1	Tesmin/TSO1-like CXC domain-containing protein	[detail]	821849
7.5	AT1G72480	Lung seven transmembrane receptor family protein	[detail]	843580
6.9	MAP65-2	microtubule-associated protein 65-2	[detail]	828783
6.2	TMN6	Endomembrane protein 70 protein family	[detail]	841956

Coexpressed
gene list

[Coexpressed gene list for AT5G08580]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250540_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250540_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250540_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830759
Refseq ID (protein)	NP_001332577.1
Refseq ID (protein)	NP_568202.1

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