[←][→] ath   AT5G09960 Gene
functional annotation
Function   sorbin/SH3 domain protein  
GO BP
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001332505.1  NP_001332506.1  NP_568222.1 
BLAST NP_001332505.1  NP_001332506.1  NP_568222.1 
Orthologous [Ortholog page] AT5G64850 (ath)  LOC4331768 (osa)  LOC4348580 (osa)  LOC7456263 (ppo)  LOC7486338 (ppo)  LOC11442561 (mtr)  LOC11443495 (mtr)  LOC100245593 (vvi)  LOC100274633 (zma)  LOC100274922 (zma)  LOC100305497 (gma)  LOC100306075 (gma)  LOC100796591 (gma)  LOC101252490 (sly)  LOC101256083 (sly)  LOC103626226 (zma)  LOC103643587 (zma)  LOC103837557 (bra)  LOC103846850 (bra)  LOC103850350 (bra)  LOC103855263 (bra)  LOC109119995 (sly)  LOC112999324 (gma) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001332505.1)
nucl 9,  cyto_nucl 5  (predict for NP_001332506.1)
nucl 8,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_568222.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001332505.1)
other 7,  mito 3  (predict for NP_001332506.1)
other 9  (predict for NP_568222.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with AT5G09960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AT1G55160 WAS/WASL-interacting family protein [detail] 841959
6.1 AT2G28060 5'-AMP-activated protein kinase beta-2 subunit protein [detail] 817350
5.7 AT5G47180 Plant VAMP (vesicle-associated membrane protein) family protein [detail] 834764
4.9 AT2G03350 DUF538 family protein (Protein of unknown function, DUF538) [detail] 814864
4.6 AT5G57000 DEAD-box ATP-dependent RNA helicase [detail] 835802
Coexpressed
gene list		 [Coexpressed gene list for AT5G09960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250511_at
250511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250511_at
250511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250511_at
250511_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 830857      
Refseq ID (protein) NP_001332505.1 
NP_001332506.1 
NP_568222.1 


The preparation time of this page was 0.1 [sec].