ATTED-II : GeneID search result

[←][→] ath AT5G10650 Gene

functional annotation

Function

RING/U-box superfamily protein

GO BP

GO:0051865 [list] [network] protein autoubiquitination

(17 genes)

IDA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IDA ISM

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity	(204 genes)	IBA IDA
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001031869.1 NP_001331828.1 NP_196626.2

BLAST

NP_001031869.1 NP_001331828.1 NP_196626.2

Orthologous

[Ortholog page] AT4G31450 (ath) AT5G24870 (ath) LOC4328312 (osa) LOC4341936 (osa) LOC11433343 (mtr) LOC25490046 (mtr) LOC100245643 (vvi) LOC100273800 (zma) LOC100381944 (zma) LOC100787213 (gma) LOC100803211 (gma) LOC100812055 (gma) LOC100819874 (gma) LOC101255868 (sly) LOC101266656 (sly) LOC103626692 (zma) LOC103628051 (zma) LOC103645657 (zma) LOC103846786 (bra) LOC103855877 (bra) LOC103862052 (bra) LOC103874353 (bra) LOC109942658 (zma)

Subcellular
localization
wolf

nucl 9	(predict for NP_001031869.1)
nucl 8, cyto 1, mito 1, plas 1, mito_plas 1, cyto_plas 1	(predict for NP_001331828.1)
nucl 9	(predict for NP_196626.2)

Subcellular
localization
TargetP

other 7	(predict for NP_001031869.1)
other 7	(predict for NP_001331828.1)
other 7	(predict for NP_196626.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G10650 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.3	AT5G05110	Cystatin/monellin family protein	[detail]	830393
5.2	AT5G24870	RING/U-box superfamily protein	[detail]	832556
5.1	AT1G04970	lipid-binding serum glycoprotein family protein	[detail]	839357
4.5	AT5G40720	C3H4 type zinc finger protein (DUF23)	[detail]	834072

Coexpressed
gene list

[Coexpressed gene list for AT5G10650]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

246012_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

246012_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

246012_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	830929
Refseq ID (protein)	NP_001031869.1
	NP_001331828.1
	NP_196626.2

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