[][] ath   AT5G11030 Gene
functional annotation
Function   aberrant root formation protein
GO BP
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA IEA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001154704.2  NP_001154705.1  NP_001332040.1  NP_001332041.1  NP_001332042.1  NP_001332043.1  NP_001332044.1  NP_001332045.1  NP_196664.4 
BLAST NP_001154704.2  NP_001154705.1  NP_001332040.1  NP_001332041.1  NP_001332042.1  NP_001332043.1  NP_001332044.1  NP_001332045.1  NP_196664.4 
Orthologous [Ortholog page] LOC4345184 (osa)LOC7468667 (ppo)LOC11412573 (mtr)LOC25481945 (mtr)LOC100191395 (zma)LOC100264691 (vvi)LOC100817784 (gma)LOC101254132 (sly)LOC103846757 (bra)
Subcellular
localization
wolf
chlo 4,  E.R. 2,  nucl 1,  extr 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001154704.2)
chlo 3,  nucl 2,  E.R. 2,  cyto 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001154705.1)
chlo 3,  nucl 2,  E.R. 2,  plas 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for NP_001332040.1)
chlo 3,  E.R. 2,  nucl 1,  plas 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_001332041.1)
chlo 3,  E.R. 2,  nucl 1,  plas 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_001332042.1)
chlo 3,  E.R. 2,  nucl 1,  plas 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_001332043.1)
chlo 4,  E.R. 2,  chlo_mito 2,  nucl 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001332044.1)
chlo 3,  E.R. 2,  nucl 1,  plas 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_001332045.1)
chlo 4,  nucl 2,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_196664.4)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001154704.2)
chlo 5,  other 5  (predict for NP_001154705.1)
chlo 5,  other 5  (predict for NP_001332040.1)
chlo 5,  other 5  (predict for NP_001332041.1)
chlo 5,  other 5  (predict for NP_001332042.1)
chlo 5,  other 5  (predict for NP_001332043.1)
chlo 5,  other 5  (predict for NP_001332044.1)
chlo 5,  other 5  (predict for NP_001332045.1)
chlo 6  (predict for NP_196664.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ALF4 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.7 AT3G12100 Cation efflux family protein [detail] 820384
6.5 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 817731
6.0 ABCC3 multidrug resistance-associated protein 3 [detail] 820496
5.6 ERA1 Prenyltransferase family protein [detail] 834026
5.0 AT1G56610 Protein with RNI-like/FBD-like domain [detail] 842116
4.8 AT2G38660 Amino acid dehydrogenase family protein [detail] 818448
Coexpressed
gene list
[Coexpressed gene list for ALF4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245899_at
245899_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245899_at
245899_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245899_at
245899_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 830970    
Refseq ID (protein) NP_001154704.2 
NP_001154705.1 
NP_001332040.1 
NP_001332041.1 
NP_001332042.1 
NP_001332043.1 
NP_001332044.1 
NP_001332045.1 
NP_196664.4 


The preparation time of this page was 0.4 [sec].