ATTED-II : GeneID search result

[←][→] ath AT5G12080 Gene

functional annotation

Function

mechanosensitive channel of small conductance-like 10

GO BP

GO:0050982 [list] [network] detection of mechanical stimulus	(3 genes)	IBA IMP
GO:0097468 [list] [network] programmed cell death in response to reactive oxygen species	(6 genes)	IMP
GO:0010150 [list] [network] leaf senescence	(111 genes)	IMP
GO:0006820 [list] [network] anion transport	(285 genes)	IBA IDA
GO:0055085 [list] [network] transmembrane transport	(778 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IBA IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0008381 [list] [network] mechanosensitive ion channel activity

(10 genes)

IBA IDA IMP

KEGG

Protein

NP_001119212.1 NP_196769.1 NP_850810.1

BLAST

NP_001119212.1 NP_196769.1 NP_850810.1

Orthologous

[Ortholog page] MSL9 (ath) LOC4340431 (osa) LOC7473191 (ppo) LOC11423317 (mtr) LOC11428784 (mtr) LOC11442238 (mtr) LOC25486477 (mtr) LOC100245659 (vvi) LOC100257841 (vvi) LOC100262967 (vvi) LOC100777332 (gma) LOC100777617 (gma) LOC100803107 (gma) LOC100813203 (gma) LOC101245681 (sly) LOC103625685 (zma) LOC103637910 (zma) LOC103845745 (bra) LOC103845746 (bra) LOC103846669 (bra) LOC103850813 (bra) LOC103851279 (bra) LOC103855954 (bra) LOC103856384 (bra) LOC103856385 (bra) LOC103858383 (bra) LOC106794330 (gma)

Subcellular
localization
wolf

cyto 5, plas 4, chlo 1, E.R. 1	(predict for NP_001119212.1)
cyto 5, plas 4, chlo 1, E.R. 1	(predict for NP_196769.1)
cyto 5, plas 4, chlo 1, E.R. 1	(predict for NP_850810.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001119212.1)
other 7	(predict for NP_196769.1)
other 7	(predict for NP_850810.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	RNA transport	4
ath03018	RNA degradation	4
ath01200	Carbon metabolism	2

Genes directly connected with MSL10 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.8	HSP60-3A	heat shock protein 60-3A	[detail]	820599
5.7	Hsp89.1	HEAT SHOCK PROTEIN 89.1	[detail]	819968
5.4	SKB1	SHK1 binding protein 1	[detail]	829240

Coexpressed
gene list

[Coexpressed gene list for MSL10]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250326_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250326_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250326_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831081
Refseq ID (protein)	NP_001119212.1
	NP_196769.1
	NP_850810.1

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