[←][→] ath   AT5G12190 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0008380 [list] [network] RNA splicing  (272 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_196780.1 
BLAST NP_196780.1 
Orthologous [Ortholog page] LOC4334543 (osa)  LOC7463876 (ppo)  LOC11431415 (mtr)  LOC100258249 (vvi)  LOC100281981 (zma)  LOC100783741 (gma)  LOC100802877 (gma)  LOC101267636 (sly)  LOC103846660 (bra)  LOC103855957 (bra) 
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 3,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_196780.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for NP_196780.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03040 Spliceosome 2
Genes directly connected with AT5G12190 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 TOM22-I translocase of outer membrane 22-I [detail] 839317
6.5 AT2G34160 Alba DNA/RNA-binding protein [detail] 817977
6.3 AT5G13070 MSF1-like family protein [detail] 831146
6.3 AT1G77540 Acyl-CoA N-acyltransferases (NAT) superfamily protein [detail] 844090
5.9 SK4 SKP1-like 4 [detail] 838604
Coexpressed
gene list		 [Coexpressed gene list for AT5G12190]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250314_at
250314_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250314_at
250314_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250314_at
250314_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831092      
Refseq ID (protein) NP_196780.1 


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