ATTED-II : GeneID search result

[←][→] ath AT5G12850 Gene

functional annotation

Function

CCCH-type zinc finger protein with ARM repeat domain-containing protein

GO BP

GO:0006355 [list] [network] regulation of transcription, DNA-templated

(1984 genes)

TAS

GO CC

GO:0005634 [list] [network] nucleus	(10793 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS
GO:0003677 [list] [network] DNA binding	(2280 genes)	IEA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_196789.1

BLAST

NP_196789.1

Orthologous

[Ortholog page] LOC103846626 (bra) LOC103850829 (bra)

Subcellular
localization
wolf

nucl 8, cyto 1

(predict for NP_196789.1)

Subcellular
localization
TargetP

other 9

(predict for NP_196789.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	3

Genes directly connected with AT5G12850 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.7	AT2G40980	Protein kinase superfamily protein	[detail]	818698
5.9	AT1G73930	polarity axis stabilization protein	[detail]	843730
5.9	AT5G25100	Endomembrane protein 70 protein family	[detail]	832581
5.6	LGT5	los glycosyltransferase 5	[detail]	817607

Coexpressed
gene list

[Coexpressed gene list for AT5G12850]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250321_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250321_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250321_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831125
Refseq ID (protein)	NP_196789.1

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