[←][→] ath   AT5G12900 Gene
functional annotation
Function   DNA double-strand break repair RAD50 ATPase  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_196794.1 
BLAST NP_196794.1 
Orthologous [Ortholog page] LOC4345989 (osa)  LOC4347434 (osa)  LOC7487041 (ppo)  LOC11431422 (mtr)  LOC25492609 (mtr)  LOC100192884 (zma)  LOC100193579 (zma)  LOC100265521 (vvi)  LOC100272615 (zma)  LOC100279200 (zma)  LOC100779911 (gma)  LOC100786740 (gma)  LOC100814681 (gma)  LOC101252211 (sly)  LOC101266150 (sly)  LOC103846620 (bra)  LOC103850832 (bra)  LOC103855985 (bra)  LOC112941069 (sly) 
Subcellular
localization
wolf
nucl 4,  cyto 1,  golg 1,  chlo 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  chlo_mito 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for NP_196794.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for NP_196794.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G12900 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 AT4G33440 Pectin lyase-like superfamily protein [detail] 829481
5.1 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein [detail] 824358
4.8 NIK1 NSP-interacting kinase 1 [detail] 831457
4.4 AT3G23160 plant/protein (DUF668) [detail] 821892
4.3 AT5G57100 Nucleotide/sugar transporter family protein [detail] 835814
4.1 AT2G22420 Peroxidase superfamily protein [detail] 816773
Coexpressed
gene list		 [Coexpressed gene list for AT5G12900]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250265_at
250265_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250265_at
250265_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250265_at
250265_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831130      
Refseq ID (protein) NP_196794.1 


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