[←][→] ath   AT5G13270 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO:0009451 [list] [network] RNA modification  (403 genes)  IBA IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_196831.1 
BLAST NP_196831.1 
Orthologous [Ortholog page] LOC100806216 (gma)  LOC100807173 (gma)  LOC103846587 (bra)  LOC104880782 (vvi) 
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_196831.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_196831.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RARE1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.1 OTP81 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817526
10.0 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835362
9.8 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838612
9.7 AT5G39980 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833995
Coexpressed
gene list		 [Coexpressed gene list for RARE1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250283_at
250283_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250283_at
250283_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250283_at
250283_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831168      
Refseq ID (protein) NP_196831.1 


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