[←][→] ath   AT5G14460 Gene
functional annotation
Function   Pseudouridine synthase family protein  
GO BP
GO:1990481 [list] [network] mRNA pseudouridine synthesis  (3 genes)  IBA  
GO:0006400 [list] [network] tRNA modification  (63 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (20 genes)  IBA TAS  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_196950.2 
BLAST NP_196950.2 
Orthologous [Ortholog page] LOC4337577 (osa)  LOC25495110 (mtr)  LOC100259460 (vvi)  LOC100284263 (zma)  LOC100793939 (gma)  LOC101259995 (sly)  LOC103846483 (bra) 
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 2,  cyto_mito 1  (predict for NP_196950.2)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for NP_196950.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
Genes directly connected with AT5G14460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 AT3G58140 phenylalanyl-tRNA synthetase class IIc family protein [detail] 824983
8.4 AT3G19810 BTB/POZ domain protein, putative (DUF177) [detail] 821518
8.2 EMB1006 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835093
7.9 AT1G77122 Uncharacterized protein family UPF0090 [detail] 844048
7.6 AT3G28460 methyltransferase [detail] 822476
7.6 HY2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) [detail] 820069
6.8 PyrD Cytidine/deoxycytidylate deaminase family protein [detail] 827843
6.6 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 821642
6.6 HRS1 Histidyl-tRNA synthetase 1 [detail] 823753
6.0 HO2 heme oxygenase 2 [detail] 817196
5.4 AT2G38025 Cysteine proteinases superfamily protein [detail] 818381
Coexpressed
gene list		 [Coexpressed gene list for AT5G14460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250181_at
250181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250181_at
250181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250181_at
250181_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831297      
Refseq ID (protein) NP_196950.2 


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