[←][→] ath   AT5G16180 Gene
functional annotation
Function   maize chloroplast splicing factor-like protein  
GO BP
GO:0000373 [list] [network] Group II intron splicing  (24 genes)  IDA  
GO:0006417 [list] [network] regulation of translation  (146 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG
Protein NP_001332392.1  NP_197122.2 
BLAST NP_001332392.1  NP_197122.2 
Orthologous [Ortholog page] LOC541870 (zma)  LOC4345375 (osa)  LOC11427155 (mtr)  LOC100256677 (vvi)  LOC100811938 (gma)  LOC101254358 (sly)  LOC103851031 (bra) 
Subcellular
localization
wolf
chlo 6,  E.R. 2,  plas 1,  extr 1  (predict for NP_001332392.1)
chlo 5,  E.R. 2,  nucl 1,  plas 1,  extr 1,  pero 1,  nucl_plas 1  (predict for NP_197122.2)
Subcellular
localization
TargetP
scret 2  (predict for NP_001332392.1)
scret 2  (predict for NP_197122.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CRS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.7 CFM2 CRM family member 2 [detail] 821288
6.6 EMB2279 pentatricopeptide (PPR) repeat-containing protein [detail] 839941
6.4 EMB1865 CRS1 / YhbY (CRM) domain-containing protein [detail] 821368
5.5 AT3G08020 PHD finger family protein [detail] 819993
5.4 AT1G70100 neurofilament heavy protein [detail] 843346
Coexpressed
gene list		 [Coexpressed gene list for CRS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246493_at
246493_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246493_at
246493_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246493_at
246493_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831476      
Refseq ID (protein) NP_001332392.1 
NP_197122.2 


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