[←][→] ath   AT5G17240 Gene
functional annotation
Function   SET domain group 40  
GO BP
GO:0018026 [list] [network] peptidyl-lysine monomethylation  (7 genes)  IBA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0016279 [list] [network] protein-lysine N-methyltransferase activity  (47 genes)  IBA  
KEGG
Protein NP_001330251.1  NP_197226.2 
BLAST NP_001330251.1  NP_197226.2 
Orthologous [Ortholog page] LOC4343199 (osa)  LOC7493585 (ppo)  LOC11423447 (mtr)  LOC100261646 (vvi)  LOC100279317 (zma)  LOC100787452 (gma)  LOC101266180 (sly)  LOC103851095 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  nucl_plas 3,  chlo 1,  extr 1,  pero 1  (predict for NP_001330251.1)
nucl 7,  cyto 2  (predict for NP_197226.2)
Subcellular
localization
TargetP
other 6,  scret 6  (predict for NP_001330251.1)
other 8  (predict for NP_197226.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with SDG40 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 AT5G23690 Polynucleotide adenylyltransferase family protein [detail] 832434
7.0 AT4G04790 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 825816
6.8 AT1G30960 GTP-binding family protein [detail] 839983
5.1 AT4G13070 RNA-binding CRS1 / YhbY (CRM) domain protein [detail] 826921
Coexpressed
gene list		 [Coexpressed gene list for SDG40]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250084_at
250084_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250084_at
250084_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250084_at
250084_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831588      
Refseq ID (protein) NP_001330251.1 
NP_197226.2 


The preparation time of this page was 0.2 [sec].