[←][→] ath   AT5G03740 Gene
functional annotation
Function   histone deacetylase 2C  
GO BP
GO:0010162 [list] [network] seed dormancy process  (32 genes)  IBA  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IBA IDA  
GO:0006325 [list] [network] chromatin organization  (338 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004407 [list] [network] histone deacetylase activity  (35 genes)  ISS  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0016787 [list] [network] hydrolase activity  (3024 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_195994.3 
BLAST NP_195994.3 
Orthologous [Ortholog page] LOC542355 (zma)  LOC542636 (zma)  HD2A (gma)  HDA3 (ath)  LOC4339823 (osa)  LOC9272341 (osa)  LOC11434564 (mtr)  LOC25487509 (mtr)  LOC100252840 (vvi)  LOC100256817 (vvi)  HDT6 (gma)  LOC100792094 (gma)  HDT4 (gma)  HDT2 (gma)  HDT1 (gma)  LOC101244607 (sly)  HDT3 (sly)  LOC101262270 (sly)  LOC103636373 (zma)  LOC103636709 (zma)  LOC103648365 (zma)  LOC103845525 (bra)  LOC103847362 (bra)  LOC103851455 (bra)  LOC103851458 (bra)  LOC103851750 (bra)  LOC103856522 (bra)  LOC112416804 (mtr) 
Subcellular
localization
wolf
nucl 10  (predict for NP_195994.3)
Subcellular
localization
TargetP
other 8  (predict for NP_195994.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04626 Plant-pathogen interaction 2
Genes directly connected with HD2C on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 TPR10 ankyrin repeat family protein [detail] 819629
8.0 BOB1 HSP20-like chaperones superfamily protein [detail] 835421
7.3 La1 La protein 1 [detail] 829408
Coexpressed
gene list		 [Coexpressed gene list for HD2C]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250912_at
250912_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250912_at
250912_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250912_at
250912_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831733      
Refseq ID (protein) NP_195994.3 


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