[←][→] ath   AT5G18420 Gene
functional annotation
Function   CCR4-NOT transcription complex subunit  
GO BP
GO CC
GO:0030014 [list] [network] CCR4-NOT complex  (21 genes)  IEA  
GO MF
KEGG
Protein NP_001332174.1  NP_197343.1  NP_850845.1  NP_974802.1 
BLAST NP_001332174.1  NP_197343.1  NP_850845.1  NP_974802.1 
Orthologous [Ortholog page] LOC4350166 (osa)  LOC4351727 (osa)  LOC7493535 (ppo)  LOC25482957 (mtr)  LOC100193271 (zma)  LOC100266477 (vvi)  LOC100277650 (zma)  LOC100280424 (zma)  LOC100779517 (gma)  LOC100804854 (gma)  LOC101252168 (sly)  LOC103845837 (bra)  LOC103856310 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 3  (predict for NP_001332174.1)
chlo 5,  cyto 3,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for NP_197343.1)
chlo 5,  cyto 3,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for NP_850845.1)
chlo 4,  cyto 3,  nucl 1,  mito 1,  plas 1,  extr 1,  nucl_plas 1,  mito_plas 1  (predict for NP_974802.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for NP_001332174.1)
other 5,  scret 3  (predict for NP_197343.1)
other 5,  scret 3  (predict for NP_850845.1)
other 4  (predict for NP_974802.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 2
ath03013 RNA transport 2
Genes directly connected with AT5G18420 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.9 RPN13 regulatory particle non-ATPase 13 [detail] 817200
8.3 FUS12 proteasome family protein [detail] 817241
7.7 FYPP1 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 841459
7.1 AGD9 ARF-GAP domain 9 [detail] 834718
7.1 AT5G19485 transferases/nucleotidyltransferase [detail] 3770677
6.7 LFR ARM repeat superfamily protein [detail] 821873
6.1 FYPP3 flower-specific, phytochrome-associated protein phosphatase 3 [detail] 821536
6.0 AT3G09180 mediator of RNA polymerase II transcription subunit [detail] 820074
5.7 AT4G27680 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 828882
5.5 AT5G53540 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 835436
5.2 AT3G28670 oxidoreductase, zinc-binding dehydrogenase family protein [detail] 822497
Coexpressed
gene list		 [Coexpressed gene list for AT5G18420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
250042_at
250042_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
250042_at
250042_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
250042_at
250042_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 831960      
Refseq ID (protein) NP_001332174.1 
NP_197343.1 
NP_850845.1 
NP_974802.1 


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