ATTED-II : GeneID search result

[←][→] ath AT5G18440 Gene

functional annotation

Function

GATA zinc finger protein

GO BP

GO:0000492 [list] [network] box C/D snoRNP assembly	(4 genes)	IBA
GO:0000491 [list] [network] small nucleolar ribonucleoprotein complex assembly	(5 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA IDA

GO MF

GO:0030515 [list] [network] snoRNA binding

(19 genes)

IBA

KEGG

ath03015 [list] [network] mRNA surveillance pathway (115 genes)

Protein

NP_001078603.1 NP_197345.2

BLAST

NP_001078603.1 NP_197345.2

Orthologous

[Ortholog page] LOC7469503 (ppo) LOC7486858 (ppo) LOC25486959 (mtr) LOC100217067 (zma) LOC100252331 (vvi) LOC100786384 (gma) LOC100789443 (gma) LOC101251819 (sly) LOC103845836 (bra)

Subcellular
localization
wolf

nucl 6, chlo 3	(predict for NP_001078603.1)
nucl 6, chlo 3	(predict for NP_197345.2)

Subcellular
localization
TargetP

mito 7	(predict for NP_001078603.1)
mito 7	(predict for NP_197345.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2

Genes directly connected with NUFIP on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.2	AT1G13030	sphere organelles protein-like protein	[detail]	837860
7.0	AT2G21440	RNA-binding (RRM/RBD/RNP motifs) family protein	[detail]	816683
6.7	AT5G15700	DNA/RNA polymerases superfamily protein	[detail]	831424
6.3	AT5G63630	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[detail]	836483

Coexpressed
gene list

[Coexpressed gene list for NUFIP]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

250009_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

250009_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

250009_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	831962
Refseq ID (protein)	NP_001078603.1
Refseq ID (protein)	NP_197345.2

The preparation time of this page was 1.0 [sec].